Acinetobacter baumannii AB307-0294

View alignment of region with nucmer promer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve hppD nucleotide sequence in FASTA format

Retrieve hppD protein sequence in FASTA format

Retrieve ABBFA_000065 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using ABBFA_000065 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter calcoaceticus/baumannii complex Acinetobacter baumannii )

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