Acinetobacter baumannii SDF

View alignment of region with nucmer promer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve katE nucleotide sequence in FASTA format

Retrieve katE protein sequence in FASTA format

Retrieve p3ABSDF0025 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using p3ABSDF0025 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter calcoaceticus/baumannii complex Acinetobacter baumannii )

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