Acinetobacter ursingii DSM16037

Centre for Systems Biology,University of Birmingham

#18629

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

Acinetobacter sp. DSM16037
XB_AAAG01000001
354.6 KB
333 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000002
188.0 KB
181 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000003
179.4 KB
188 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000004
146.0 KB
142 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000005
123.9 KB
121 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000006
122.5 KB
135 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000007
121.1 KB
120 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000008
117.7 KB
126 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000009
109.1 KB
107 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000010
104.4 KB
94 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000011
103.5 KB
115 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000012
103.3 KB
100 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000013
89.3 KB
86 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000014
78.7 KB
75 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000015
76.9 KB
70 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000016
71.7 KB
74 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000017
63.0 KB
64 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000018
58.9 KB
56 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000019
58.5 KB
56 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000020
57.3 KB
63 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000021
52.9 KB
54 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000022
52.2 KB
56 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000023
51.8 KB
61 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000024
48.6 KB
49 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000025
45.1 KB
43 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000026
44.9 KB
44 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000027
44.4 KB
45 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000028
42.9 KB
44 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000029
41.0 KB
44 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000030
39.1 KB
35 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000031
33.2 KB
27 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000032
33.1 KB
40 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000033
32.5 KB
30 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000034
31.9 KB
26 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000035
31.0 KB
30 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000036
29.9 KB
23 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000037
29.7 KB
30 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000038
27.6 KB
29 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000039
26.8 KB
30 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000040
24.8 KB
22 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000041
23.4 KB
23 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000042
20.7 KB
26 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000043
18.3 KB
19 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000044
17.6 KB
13 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000045
17.0 KB
16 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000046
16.4 KB
21 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000047
15.8 KB
15 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000048
14.7 KB
17 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000049
13.4 KB
13 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000050
12.8 KB
11 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000051
12.5 KB
8 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000052
11.8 KB
11 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000053
11.7 KB
9 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000054
10.7 KB
11 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000055
9.2 KB
9 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000056
8.8 KB
10 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000057
8.3 KB
6 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000058
7.3 KB
8 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000059
6.3 KB
5 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000060
6.3 KB
7 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000061
5.7 KB
6 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000062
5.7 KB
8 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000063
5.5 KB
9 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000064
4.7 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000065
4.6 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000066
4.2 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000067
4.0 KB
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000068
3.9 KB
5 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000069
3.7 KB
5 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000070
3.6 KB
4 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000071
3.6 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000072
3.5 KB
4 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000073
3.0 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000074
3.0 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000075
3.0 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000076
2.7 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000077
2.7 KB
4 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000078
2.4 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000079
2.3 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000080
2.3 KB
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000081
2.3 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000082
2.2 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000083
1.8 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000084
1.6 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000085
1.6 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000086
1.6 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000087
1.6 KB
3 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000088
1.4 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000089
1.4 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000090
1.4 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000091
1.4 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000092
1.4 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000093
1.3 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000094
1.3 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000095
1.3 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000096
1.3 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000097
1.2 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000098
1.1 KB
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000099
1.1 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000100
1.1 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000101
1.1 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000102
1.0 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000103
1.0 KB
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000104
1006 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000105
993 bytes
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000106
980 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000107
963 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000108
946 bytes
2 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000109
943 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000110
926 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000111
902 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000112
844 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000113
806 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000114
779 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000115
750 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000116
718 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000117
709 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000118
700 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000119
666 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000120
624 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000121
597 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000122
588 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000123
558 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000124
556 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000125
548 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000126
548 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000127
517 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000128
516 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000129
506 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000130
472 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000131
468 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000132
450 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000133
415 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000134
388 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000135
380 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000136
375 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000137
354 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000138
339 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000139
302 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000140
281 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000141
251 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000142
218 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000143
214 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000144
208 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000145
203 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000146
178 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000147
163 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000148
163 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000149
154 bytes
1 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000150
146 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000151
130 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000152
118 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000153
116 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000154
100 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000155
94 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000156
94 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000157
92 bytes
0 CDS

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Acinetobacter sp. DSM16037
XB_AAAG01000158
72 bytes
0 CDS

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Taxonomy

External Links

Acinetobacter ursingii DSM16037

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Sequences

PubMed Search for Acinetobacter ursingii DSM16037

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