Alteromonadales bacterium TW-7

J. Craig Venter Institute

Genome Size: 4.1 megabases, GC Content: 39.7%, Released Date: Dec. 15, 2006 #17696

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAVS01000001
241.5 KB
233 CDS

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whole genome shotgun sequence
NZ_AAVS01000002
229.2 KB
216 CDS

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whole genome shotgun sequence
NZ_AAVS01000003
214.4 KB
196 CDS

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whole genome shotgun sequence
NZ_AAVS01000004
192.7 KB
180 CDS

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whole genome shotgun sequence
NZ_AAVS01000005
184.9 KB
178 CDS

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whole genome shotgun sequence
NZ_AAVS01000006
168.5 KB
164 CDS

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whole genome shotgun sequence
NZ_AAVS01000007
140.2 KB
129 CDS

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whole genome shotgun sequence
NZ_AAVS01000008
138.9 KB
123 CDS

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whole genome shotgun sequence
NZ_AAVS01000009
131.4 KB
109 CDS

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whole genome shotgun sequence
NZ_AAVS01000010
125.4 KB
130 CDS

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whole genome shotgun sequence
NZ_AAVS01000011
124.6 KB
119 CDS

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whole genome shotgun sequence
NZ_AAVS01000012
121.3 KB
122 CDS

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whole genome shotgun sequence
NZ_AAVS01000013
113.8 KB
93 CDS

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whole genome shotgun sequence
NZ_AAVS01000014
109.9 KB
105 CDS

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whole genome shotgun sequence
NZ_AAVS01000015
100.4 KB
90 CDS

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whole genome shotgun sequence
NZ_AAVS01000016
98.6 KB
95 CDS

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whole genome shotgun sequence
NZ_AAVS01000017
90.5 KB
82 CDS

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whole genome shotgun sequence
NZ_AAVS01000018
89.6 KB
74 CDS

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whole genome shotgun sequence
NZ_AAVS01000019
89.5 KB
82 CDS

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whole genome shotgun sequence
NZ_AAVS01000020
81.5 KB
78 CDS

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whole genome shotgun sequence
NZ_AAVS01000021
78.6 KB
80 CDS

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whole genome shotgun sequence
NZ_AAVS01000022
68.7 KB
65 CDS

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whole genome shotgun sequence
NZ_AAVS01000023
68.1 KB
63 CDS

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whole genome shotgun sequence
NZ_AAVS01000024
67.8 KB
71 CDS

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whole genome shotgun sequence
NZ_AAVS01000025
59.8 KB
59 CDS

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whole genome shotgun sequence
NZ_AAVS01000026
49.7 KB
46 CDS

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whole genome shotgun sequence
NZ_AAVS01000027
48.3 KB
45 CDS

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whole genome shotgun sequence
NZ_AAVS01000028
47.5 KB
46 CDS

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whole genome shotgun sequence
NZ_AAVS01000029
45.1 KB
49 CDS

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whole genome shotgun sequence
NZ_AAVS01000030
44.9 KB
38 CDS

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whole genome shotgun sequence
NZ_AAVS01000031
43.3 KB
33 CDS

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whole genome shotgun sequence
NZ_AAVS01000032
41.2 KB
44 CDS

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whole genome shotgun sequence
NZ_AAVS01000033
39.5 KB
32 CDS

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whole genome shotgun sequence
NZ_AAVS01000034
36.5 KB
45 CDS

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whole genome shotgun sequence
NZ_AAVS01000035
35.4 KB
34 CDS

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whole genome shotgun sequence
NZ_AAVS01000036
34.9 KB
31 CDS

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whole genome shotgun sequence
NZ_AAVS01000037
34.4 KB
30 CDS

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whole genome shotgun sequence
NZ_AAVS01000038
33.5 KB
32 CDS

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whole genome shotgun sequence
NZ_AAVS01000039
30.2 KB
25 CDS

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whole genome shotgun sequence
NZ_AAVS01000040
26.8 KB
18 CDS

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whole genome shotgun sequence
NZ_AAVS01000041
26.7 KB
21 CDS

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whole genome shotgun sequence
NZ_AAVS01000042
25.0 KB
27 CDS

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whole genome shotgun sequence
NZ_AAVS01000043
24.1 KB
23 CDS

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whole genome shotgun sequence
NZ_AAVS01000044
22.9 KB
22 CDS

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whole genome shotgun sequence
NZ_AAVS01000045
20.8 KB
19 CDS

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whole genome shotgun sequence
NZ_AAVS01000046
17.3 KB
18 CDS

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whole genome shotgun sequence
NZ_AAVS01000047
14.6 KB
13 CDS

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whole genome shotgun sequence
NZ_AAVS01000048
13.6 KB
14 CDS

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whole genome shotgun sequence
NZ_AAVS01000049
13.2 KB
14 CDS

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whole genome shotgun sequence
NZ_AAVS01000050
13.2 KB
14 CDS

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whole genome shotgun sequence
NZ_AAVS01000051
12.3 KB
17 CDS

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whole genome shotgun sequence
NZ_AAVS01000052
11.5 KB
10 CDS

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whole genome shotgun sequence
NZ_AAVS01000053
8.9 KB
11 CDS

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whole genome shotgun sequence
NZ_AAVS01000054
8.8 KB
16 CDS

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whole genome shotgun sequence
NZ_AAVS01000055
6.1 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVS01000056
6.1 KB
8 CDS

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whole genome shotgun sequence
NZ_AAVS01000057
4.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000058
4.0 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000059
3.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000060
3.0 KB
6 CDS

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whole genome shotgun sequence
NZ_AAVS01000061
3.0 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000062
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000063
2.7 KB
4 CDS

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whole genome shotgun sequence
NZ_AAVS01000064
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_AAVS01000065
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_AAVS01000066
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000067
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000068
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000069
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000070
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000071
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000072
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000073
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_AAVS01000074
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AAVS01000075
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_AAVS01000076
1011 bytes
2 CDS

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Taxonomy

External Links

Alteromonadales bacterium TW-7

Search Genome

Sequences

PubMed Search for Alteromonadales bacterium TW-7

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