Anaerococcus hydrogenalis DSM 7454

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 29.6%, Released Date: Oct. 1, 2008 #17699

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABXA01000001
30.7 KB
37 CDS

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whole genome shotgun sequence
NZ_ABXA01000002
72.0 KB
85 CDS

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whole genome shotgun sequence
NZ_ABXA01000003
105.8 KB
120 CDS

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whole genome shotgun sequence
NZ_ABXA01000004
40.6 KB
33 CDS

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whole genome shotgun sequence
NZ_ABXA01000005
12.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABXA01000006
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXA01000007
26.7 KB
32 CDS

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whole genome shotgun sequence
NZ_ABXA01000008
5.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ABXA01000009
9.6 KB
12 CDS

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whole genome shotgun sequence
NZ_ABXA01000010
40.9 KB
38 CDS

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whole genome shotgun sequence
NZ_ABXA01000011
37.8 KB
33 CDS

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whole genome shotgun sequence
NZ_ABXA01000012
88.4 KB
98 CDS

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whole genome shotgun sequence
NZ_ABXA01000013
4.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXA01000014
31.7 KB
34 CDS

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whole genome shotgun sequence
NZ_ABXA01000015
563 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXA01000016
8.9 KB
12 CDS

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whole genome shotgun sequence
NZ_ABXA01000017
16.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ABXA01000018
2.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXA01000019
223.9 KB
256 CDS

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whole genome shotgun sequence
NZ_ABXA01000020
77.0 KB
95 CDS

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whole genome shotgun sequence
NZ_ABXA01000021
7.6 KB
11 CDS

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whole genome shotgun sequence
NZ_ABXA01000022
5.7 KB
9 CDS

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whole genome shotgun sequence
NZ_ABXA01000023
551 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXA01000024
41.9 KB
48 CDS

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whole genome shotgun sequence
NZ_ABXA01000025
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXA01000026
17.1 KB
21 CDS

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whole genome shotgun sequence
NZ_ABXA01000027
15.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ABXA01000028
26.7 KB
35 CDS

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whole genome shotgun sequence
NZ_ABXA01000029
8.8 KB
13 CDS

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whole genome shotgun sequence
NZ_ABXA01000030
18.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ABXA01000031
103.9 KB
106 CDS

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whole genome shotgun sequence
NZ_ABXA01000032
43.3 KB
43 CDS

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whole genome shotgun sequence
NZ_ABXA01000033
579 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXA01000034
29.3 KB
36 CDS

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whole genome shotgun sequence
NZ_ABXA01000035
14.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ABXA01000036
108.8 KB
135 CDS

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whole genome shotgun sequence
NZ_ABXA01000037
62.1 KB
67 CDS

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whole genome shotgun sequence
NZ_ABXA01000038
609 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXA01000039
2.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXA01000040
16.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ABXA01000041
13.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ABXA01000042
568 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXA01000043
162.4 KB
182 CDS

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whole genome shotgun sequence
NZ_ABXA01000044
118.7 KB
144 CDS

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whole genome shotgun sequence
NZ_ABXA01000045
829 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXA01000046
2.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXA01000047
98.3 KB
101 CDS

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whole genome shotgun sequence
NZ_ABXA01000048
5.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABXA01000049
71.7 KB
78 CDS

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whole genome shotgun sequence
NZ_ABXA01000050
551 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXA01000051
5.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ABXA01000052
2.7 KB
4 CDS

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Taxonomy

External Links

Anaerococcus hydrogenalis DSM 7454

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Sequences

PubMed Search for Anaerococcus hydrogenalis DSM 7454

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