Anaerostipes caccae DSM 14662

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 44.3%, Released Date: May 24, 2007 #17704

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABAX03000001
252.5 KB
238 CDS

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whole genome shotgun sequence
NZ_ABAX03000002
157.9 KB
171 CDS

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whole genome shotgun sequence
NZ_ABAX03000003
105.3 KB
110 CDS

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whole genome shotgun sequence
NZ_ABAX03000004
61.2 KB
57 CDS

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whole genome shotgun sequence
NZ_ABAX03000005
255.1 KB
292 CDS

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whole genome shotgun sequence
NZ_ABAX03000006
868 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABAX03000007
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAX03000008
680 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABAX03000009
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAX03000010
210.1 KB
224 CDS

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whole genome shotgun sequence
NZ_ABAX03000011
1.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAX03000012
742.9 KB
801 CDS

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whole genome shotgun sequence
NZ_ABAX03000013
165.7 KB
181 CDS

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whole genome shotgun sequence
NZ_ABAX03000014
396.5 KB
435 CDS

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whole genome shotgun sequence
NZ_ABAX03000015
26.8 KB
32 CDS

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whole genome shotgun sequence
NZ_ABAX03000016
37.8 KB
41 CDS

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whole genome shotgun sequence
NZ_ABAX03000017
50.4 KB
50 CDS

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whole genome shotgun sequence
NZ_ABAX03000018
29.7 KB
31 CDS

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whole genome shotgun sequence
NZ_ABAX03000019
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAX03000020
1.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAX03000021
34.3 KB
34 CDS

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whole genome shotgun sequence
NZ_ABAX03000022
21.0 KB
25 CDS

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whole genome shotgun sequence
NZ_ABAX03000023
20.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ABAX03000024
439.6 KB
475 CDS

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whole genome shotgun sequence
NZ_ABAX03000025
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAX03000026
984 bytes
4 CDS

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whole genome shotgun sequence
NZ_ABAX03000027
3.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAX03000028
2.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAX03000029
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAX03000030
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAX03000031
5.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABAX03000032
849 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABAX03000033
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABAX03000034
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABAX03000035
2.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAX03000036
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABAX03000037
147.2 KB
155 CDS

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whole genome shotgun sequence
NZ_ABAX03000038
174.3 KB
189 CDS

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whole genome shotgun sequence
NZ_ABAX03000039
156.6 KB
159 CDS

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Taxonomy

External Links

Anaerostipes caccae DSM 14662

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Sequences

PubMed Search for Anaerostipes caccae DSM 14662

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