Anaerotruncus colihominis DSM 17241

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 54.2%, Released Date: Oct. 10, 2007 #17705

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABGD02000001
42.6 KB
53 CDS

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whole genome shotgun sequence
NZ_ABGD02000002
799 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGD02000003
123.1 KB
169 CDS

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whole genome shotgun sequence
NZ_ABGD02000004
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABGD02000005
300.7 KB
357 CDS

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whole genome shotgun sequence
NZ_ABGD02000006
266.2 KB
315 CDS

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whole genome shotgun sequence
NZ_ABGD02000007
243.3 KB
292 CDS

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whole genome shotgun sequence
NZ_ABGD02000008
64.8 KB
78 CDS

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whole genome shotgun sequence
NZ_ABGD02000009
62.3 KB
79 CDS

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whole genome shotgun sequence
NZ_ABGD02000010
25.5 KB
31 CDS

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whole genome shotgun sequence
NZ_ABGD02000011
51.3 KB
61 CDS

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whole genome shotgun sequence
NZ_ABGD02000012
224.2 KB
249 CDS

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whole genome shotgun sequence
NZ_ABGD02000013
51.5 KB
66 CDS

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whole genome shotgun sequence
NZ_ABGD02000014
275.9 KB
346 CDS

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whole genome shotgun sequence
NZ_ABGD02000015
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGD02000016
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGD02000017
4.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ABGD02000018
153.6 KB
193 CDS

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whole genome shotgun sequence
NZ_ABGD02000019
125.7 KB
177 CDS

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whole genome shotgun sequence
NZ_ABGD02000020
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGD02000021
64.3 KB
72 CDS

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whole genome shotgun sequence
NZ_ABGD02000022
67.8 KB
96 CDS

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whole genome shotgun sequence
NZ_ABGD02000023
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGD02000024
434.0 KB
513 CDS

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whole genome shotgun sequence
NZ_ABGD02000025
254.5 KB
329 CDS

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whole genome shotgun sequence
NZ_ABGD02000026
21.4 KB
28 CDS

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whole genome shotgun sequence
NZ_ABGD02000027
263.1 KB
310 CDS

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whole genome shotgun sequence
NZ_ABGD02000028
786 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABGD02000029
10.5 KB
15 CDS

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whole genome shotgun sequence
NZ_ABGD02000030
239.4 KB
281 CDS

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whole genome shotgun sequence
NZ_ABGD02000031
8.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ABGD02000032
4.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGD02000033
3.1 KB
5 CDS

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whole genome shotgun sequence
NZ_ABGD02000034
197.5 KB
234 CDS

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whole genome shotgun sequence
NZ_ABGD02000035
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABGD02000036
37.9 KB
50 CDS

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Taxonomy

External Links

Anaerotruncus colihominis DSM 17241

Search Genome

Sequences

PubMed Search for Anaerotruncus colihominis DSM 17241

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