Aromatoleum aromaticum EbN1

Max Planck Institute

Genome Size: 4.73 megabases, GC Content: 64.7%, Released Date: Nov. 20, 2004 #16685

Completed genome

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This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

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Sequences

complete genome
NC_006513
4.1 MB
4124 CDS

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Azoarcus sp. EbN1 plasmid 1
NC_006823
202.5 KB
272 CDS

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Azoarcus sp. EbN1 plasmid 2
NC_006824
218.4 KB
194 CDS

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References

Substrate-dependent regulation of anaerobic degradation pathways for toluene and ethylbenzene in a denitrifying bacterium, strain EbN1
Kuhner,S., Wohlbrand,L., Fritz,I., Wruck,W., Hultschig,C., Hufnagel,P., Kube,M., Reinhardt,R. and Rabus,R. J. Bacteriol. 187 (4), 1493-1503 (2005)
PubMed, PubGet, HubMed
The genome sequence of an anaerobic aromatic-degrading denitrifying bacterium, strain EbN1
Rabus,R., Kube,M., Heider,J., Beck,A., Heitmann,K., Widdel,F. and Reinhardt,R. Arch. Microbiol. 183 (1), 27-36 (2005)
PubMed, PubGet, HubMed
Genes involved in the anaerobic degradation of toluene in a denitrifying bacterium, strain EbN1
Kube,M., Heider,J., Amann,J., Hufnagel,P., Kuhner,S., Beck,A., Reinhardt,R. and Rabus,R. Arch. Microbiol. 181 (3), 182-194 (2004)
PubMed, PubGet, HubMed
Genes involved in the anaerobic degradation of ethylbenzene in a denitrifying bacterium, strain EbN1
Rabus,R., Kube,M., Beck,A., Widdel,F. and Reinhardt,R. Arch. Microbiol. 178 (6), 506-516 (2002)
PubMed, PubGet, HubMed

Taxonomy

External Links

Aromatoleum aromaticum EbN1

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Sequences

References

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