Arthrospira maxima CS-328

DOE Joint Genome Institute

GC Content: 44.8%, Released Date: Oct. 15, 2008 #17709

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABYK01000001
316.6 KB
263 CDS

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whole genome shotgun sequence
NZ_ABYK01000002
239.5 KB
197 CDS

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whole genome shotgun sequence
NZ_ABYK01000003
228.3 KB
237 CDS

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whole genome shotgun sequence
NZ_ABYK01000004
189.8 KB
170 CDS

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whole genome shotgun sequence
NZ_ABYK01000005
189.5 KB
165 CDS

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whole genome shotgun sequence
NZ_ABYK01000006
183.1 KB
206 CDS

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whole genome shotgun sequence
NZ_ABYK01000007
166.0 KB
152 CDS

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whole genome shotgun sequence
NZ_ABYK01000008
152.7 KB
143 CDS

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whole genome shotgun sequence
NZ_ABYK01000009
149.2 KB
139 CDS

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whole genome shotgun sequence
NZ_ABYK01000010
144.7 KB
159 CDS

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whole genome shotgun sequence
NZ_ABYK01000011
143.6 KB
172 CDS

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whole genome shotgun sequence
NZ_ABYK01000012
137.7 KB
140 CDS

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whole genome shotgun sequence
NZ_ABYK01000013
132.0 KB
123 CDS

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whole genome shotgun sequence
NZ_ABYK01000014
123.7 KB
105 CDS

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whole genome shotgun sequence
NZ_ABYK01000015
111.2 KB
133 CDS

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whole genome shotgun sequence
NZ_ABYK01000016
99.8 KB
89 CDS

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whole genome shotgun sequence
NZ_ABYK01000017
96.3 KB
79 CDS

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whole genome shotgun sequence
NZ_ABYK01000018
91.6 KB
83 CDS

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whole genome shotgun sequence
NZ_ABYK01000019
90.4 KB
86 CDS

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whole genome shotgun sequence
NZ_ABYK01000020
90.4 KB
93 CDS

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whole genome shotgun sequence
NZ_ABYK01000021
86.5 KB
71 CDS

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whole genome shotgun sequence
NZ_ABYK01000022
85.8 KB
91 CDS

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whole genome shotgun sequence
NZ_ABYK01000023
81.5 KB
103 CDS

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whole genome shotgun sequence
NZ_ABYK01000024
79.5 KB
59 CDS

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whole genome shotgun sequence
NZ_ABYK01000025
77.6 KB
71 CDS

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whole genome shotgun sequence
NZ_ABYK01000026
77.2 KB
78 CDS

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whole genome shotgun sequence
NZ_ABYK01000027
75.3 KB
58 CDS

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whole genome shotgun sequence
NZ_ABYK01000028
69.3 KB
72 CDS

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whole genome shotgun sequence
NZ_ABYK01000029
67.4 KB
85 CDS

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whole genome shotgun sequence
NZ_ABYK01000030
65.8 KB
81 CDS

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whole genome shotgun sequence
NZ_ABYK01000031
65.3 KB
73 CDS

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whole genome shotgun sequence
NZ_ABYK01000032
62.8 KB
63 CDS

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whole genome shotgun sequence
NZ_ABYK01000033
58.9 KB
64 CDS

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whole genome shotgun sequence
NZ_ABYK01000034
57.7 KB
72 CDS

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whole genome shotgun sequence
NZ_ABYK01000035
56.7 KB
58 CDS

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whole genome shotgun sequence
NZ_ABYK01000036
52.9 KB
44 CDS

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whole genome shotgun sequence
NZ_ABYK01000037
50.1 KB
42 CDS

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whole genome shotgun sequence
NZ_ABYK01000038
49.2 KB
39 CDS

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whole genome shotgun sequence
NZ_ABYK01000039
46.6 KB
49 CDS

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whole genome shotgun sequence
NZ_ABYK01000040
45.9 KB
41 CDS

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whole genome shotgun sequence
NZ_ABYK01000041
45.8 KB
41 CDS

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whole genome shotgun sequence
NZ_ABYK01000042
44.7 KB
50 CDS

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whole genome shotgun sequence
NZ_ABYK01000043
43.8 KB
39 CDS

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whole genome shotgun sequence
NZ_ABYK01000044
41.7 KB
42 CDS

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whole genome shotgun sequence
NZ_ABYK01000045
40.8 KB
44 CDS

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whole genome shotgun sequence
NZ_ABYK01000046
40.1 KB
45 CDS

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whole genome shotgun sequence
NZ_ABYK01000047
38.5 KB
44 CDS

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whole genome shotgun sequence
NZ_ABYK01000048
38.5 KB
45 CDS

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whole genome shotgun sequence
NZ_ABYK01000049
37.4 KB
32 CDS

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whole genome shotgun sequence
NZ_ABYK01000050
35.9 KB
28 CDS

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whole genome shotgun sequence
NZ_ABYK01000051
35.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ABYK01000052
34.9 KB
27 CDS

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whole genome shotgun sequence
NZ_ABYK01000053
34.2 KB
27 CDS

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whole genome shotgun sequence
NZ_ABYK01000054
32.5 KB
33 CDS

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whole genome shotgun sequence
NZ_ABYK01000055
31.8 KB
30 CDS

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whole genome shotgun sequence
NZ_ABYK01000056
31.4 KB
27 CDS

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whole genome shotgun sequence
NZ_ABYK01000057
31.2 KB
32 CDS

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whole genome shotgun sequence
NZ_ABYK01000058
30.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ABYK01000059
29.7 KB
41 CDS

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whole genome shotgun sequence
NZ_ABYK01000060
29.0 KB
24 CDS

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whole genome shotgun sequence
NZ_ABYK01000061
27.6 KB
28 CDS

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whole genome shotgun sequence
NZ_ABYK01000062
27.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ABYK01000063
27.0 KB
23 CDS

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whole genome shotgun sequence
NZ_ABYK01000064
27.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ABYK01000065
26.6 KB
25 CDS

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whole genome shotgun sequence
NZ_ABYK01000066
25.7 KB
19 CDS

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whole genome shotgun sequence
NZ_ABYK01000067
25.5 KB
14 CDS

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whole genome shotgun sequence
NZ_ABYK01000068
24.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ABYK01000069
21.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ABYK01000070
19.5 KB
27 CDS

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whole genome shotgun sequence
NZ_ABYK01000071
19.2 KB
19 CDS

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whole genome shotgun sequence
NZ_ABYK01000072
18.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABYK01000073
17.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABYK01000074
17.6 KB
15 CDS

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whole genome shotgun sequence
NZ_ABYK01000075
16.3 KB
13 CDS

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whole genome shotgun sequence
NZ_ABYK01000076
15.9 KB
17 CDS

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whole genome shotgun sequence
NZ_ABYK01000077
15.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABYK01000078
15.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ABYK01000079
15.1 KB
16 CDS

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whole genome shotgun sequence
NZ_ABYK01000080
14.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ABYK01000081
14.7 KB
18 CDS

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whole genome shotgun sequence
NZ_ABYK01000082
14.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ABYK01000083
14.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ABYK01000084
14.1 KB
18 CDS

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whole genome shotgun sequence
NZ_ABYK01000085
13.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ABYK01000086
13.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ABYK01000087
13.5 KB
11 CDS

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whole genome shotgun sequence
NZ_ABYK01000088
13.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ABYK01000089
12.9 KB
11 CDS

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whole genome shotgun sequence
NZ_ABYK01000090
12.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ABYK01000091
11.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ABYK01000092
10.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ABYK01000093
10.3 KB
13 CDS

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whole genome shotgun sequence
NZ_ABYK01000094
10.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ABYK01000095
9.9 KB
16 CDS

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whole genome shotgun sequence
NZ_ABYK01000096
9.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ABYK01000097
9.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ABYK01000098
7.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ABYK01000099
7.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ABYK01000100
7.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ABYK01000101
7.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000102
6.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ABYK01000103
4.9 KB
7 CDS

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whole genome shotgun sequence
NZ_ABYK01000104
4.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000105
4.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000106
4.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABYK01000107
3.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000108
3.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ABYK01000109
3.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABYK01000110
3.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABYK01000111
3.4 KB
7 CDS

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whole genome shotgun sequence
NZ_ABYK01000112
3.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABYK01000113
3.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ABYK01000114
3.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABYK01000115
3.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000116
3.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000117
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000118
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABYK01000119
2.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABYK01000120
2.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000121
2.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABYK01000122
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000123
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABYK01000124
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABYK01000125
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABYK01000126
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000127
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABYK01000128
2.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABYK01000129
2.0 KB
3 CDS

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Taxonomy

External Links

Arthrospira maxima CS-328

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Sequences

PubMed Search for Arthrospira maxima CS-328

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