Bacillus cereus biovar anthracis str. CI

Georg-August-University Goettingen , Goettingen Genomics Laboratory

Genome Size: 5.488 megabases, Released Date: July 9, 2010 #19765

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
CP001746
5.0 MB
5221 CDS

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plasmid pBAslCI14
CP001749
13.9 KB
18 CDS

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plasmid pCI-XO1
CP001747
177.6 KB
210 CDS

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plasmid pCI-XO2
CP001748
92.3 KB
109 CDS

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References

The genome of a Bacillus isolate causing anthrax in chimpanzees combines chromosomal properties of B. cereus with B. anthracis virulence plasmids
Klee,S.R., Brzuszkiewicz,E.B., Nattermann,H., Bruggemann,H., Dupke,S., Wollherr,A., Franz,T., Pauli,G., Appel,B., Liebl,W., Couacy-Hymann,E., Boesch,C., Meyer,F.D., Leendertz,F.H., Ellerbrok,H., Gottschalk,G., Grunow,R. and Liesegang,H. PLoS ONE 5 (7), E10986 (2010)
PubMed, PubGet, HubMed

Taxonomy

External Links

Bacillus cereus biovar anthracis str. CI

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Sequences

References

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