Bacillus coagulans 36D1

DOE Joint Genome Institute

GC Content: 46.5%, Released Date: Feb. 6, 2007 #17763

incomplete

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Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

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Sequences

whole genome shotgun sequence
NZ_AAWV02000001
2.8 MB
2693 CDS

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whole genome shotgun sequence
NZ_AAWV02000002
552.1 KB
586 CDS

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whole genome shotgun sequence
NZ_AAWV02000003
63.9 KB
66 CDS

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whole genome shotgun sequence
NZ_AAWV02000004
2.6 KB
2 CDS

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Taxonomy

External Links

Bacillus coagulans 36D1

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Sequences

PubMed Search for Bacillus coagulans 36D1

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