Bacillus cytotoxicus NVH 391-98

US DOE Joint Genome Institute , DOE Joint Genome Institute , INRA

Genome Size: 4.11 megabases, GC Content: 35.9%, Released Date: July 17, 2007 #16710

Completed genome

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome
NC_009674
3.9 MB
3833 CDS

Table view
Circular View
Artemis Viewer

Bacillus cereus subsp. cytotoxis NVH 391-98 plasmid pBC9801
NC_009673
7.0 KB
11 CDS

Table view
Circular View
Artemis Viewer

References

Extending the Bacillus cereus group genomics to putative food-borne pathogens of different toxicity
Lapidus,A., Goltsman,E., Auger,S., Galleron,N., Segurens,B., Dossat,C., Land,M.L., Broussolle,V., Brillard,J., Guinebretiere,M.H., Sanchis,V., Nguen-The,C., Lereclus,D., Richardson,P., Wincker,P., Weissenbach,J., Ehrlich,S.D. and Sorokin,A. Chem. Biol. Interact. 171 (2), 236-249 (2008)
PubMed, PubGet, HubMed

Taxonomy

External Links

Bacillus cytotoxicus NVH 391-98

Search Genome

Sequences

References

Related Genomes