Bacillus licheniformis ATCC 14580

Novozymes Biotech

Genome Size: 4.2 megabases, GC Content: 46.2%, Released Date: Oct. 6, 2004 #16713

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
NC_006270
4.0 MB
4173 CDS

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References

Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species
Rey,M.W., Ramaiya,P., Nelson,B.A., Brody-Karpin,S.D., Zaretsky,E.J., Tang,M., de Leon,A.L., Xiang,H., Gusti,V., Clausen,I.G., Olsen,P.B., Rasmussen,M.D., Andersen,J.T., Jorgensen,P.L., Larsen,T.S., Sorokin,A., Bolotin,A., Lapidus,A., Galleron,N., Ehrlich,S.D. and Berka,R.M. Genome Biol. 5 (10), R77 (2004)
PubMed, PubGet, HubMed

Taxonomy

External Links

Bacillus licheniformis ATCC 14580

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Sequences

References

Related Genomes