Bacillus megaterium QM B1551

Institute for Genome Sciences, University of Maryland School of Medicine , J. Craig Venter Institute , University of Wisconsin, Surgery, USA, Madison

Genome Size: 5.5225 megabases, GC Content: 37.9%, Released Date: April 8, 2010 #19767

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
CP001983
4.9 MB
5130 CDS

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plasmid pBM100
CP001984
5.3 KB
8 CDS

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plasmid pBM200
CP001985
8.9 KB
13 CDS

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plasmid pBM300
CP001986
26.0 KB
38 CDS

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plasmid pBM400
CP001987
52.6 KB
60 CDS

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plasmid pBM500
CP001988
65.4 KB
94 CDS

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plasmid pBM600
CP001989
97.4 KB
111 CDS

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plasmid pBM700
CP001990
160.6 KB
175 CDS

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Taxonomy

External Links

Bacillus megaterium QM B1551

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Sequences

PubMed Search for Bacillus megaterium QM B1551

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