Bacillus pumilus ATCC 7061

J. Craig Venter Institute

GC Content: 41.7%, Released Date: July 9, 2008 #17769

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABRX01000001
920.0 KB
969 CDS

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whole genome shotgun sequence
NZ_ABRX01000002
596.3 KB
651 CDS

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whole genome shotgun sequence
NZ_ABRX01000003
475.2 KB
396 CDS

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whole genome shotgun sequence
NZ_ABRX01000004
472.4 KB
484 CDS

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whole genome shotgun sequence
NZ_ABRX01000005
344.1 KB
381 CDS

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whole genome shotgun sequence
NZ_ABRX01000006
323.0 KB
355 CDS

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whole genome shotgun sequence
NZ_ABRX01000007
220.9 KB
239 CDS

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whole genome shotgun sequence
NZ_ABRX01000008
111.3 KB
131 CDS

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whole genome shotgun sequence
NZ_ABRX01000009
104.8 KB
115 CDS

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whole genome shotgun sequence
NZ_ABRX01000010
65.7 KB
69 CDS

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whole genome shotgun sequence
NZ_ABRX01000011
55.0 KB
58 CDS

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whole genome shotgun sequence
NZ_ABRX01000012
29.8 KB
32 CDS

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whole genome shotgun sequence
NZ_ABRX01000013
19.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ABRX01000014
2.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABRX01000015
2.3 KB
0 CDS

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whole genome shotgun sequence
NZ_ABRX01000016
1.8 KB
0 CDS

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Taxonomy

External Links

Bacillus pumilus ATCC 7061

Search Genome

Sequences

PubMed Search for Bacillus pumilus ATCC 7061

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