Bacillus subtilis gtP20b

Zhejiang University, China

Genome Size: 4.1 megabases, #20154

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

1, whole genome shotgun sequence
AEHM01000001
14.4 KB
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2, whole genome shotgun sequence
AEHM01000002
20.0 KB
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3, whole genome shotgun sequence
AEHM01000003
58.4 KB
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4, whole genome shotgun sequence
AEHM01000004
254 bytes
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5, whole genome shotgun sequence
AEHM01000005
229 bytes
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6, whole genome shotgun sequence
AEHM01000006
642 bytes
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7, whole genome shotgun sequence
AEHM01000007
4.6 KB
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8, whole genome shotgun sequence
AEHM01000008
142 bytes
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9, whole genome shotgun sequence
AEHM01000009
62.9 KB
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10, whole genome shotgun sequence
AEHM01000010
853 bytes
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11, whole genome shotgun sequence
AEHM01000011
4.8 KB
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12, whole genome shotgun sequence
AEHM01000012
26.6 KB
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13, whole genome shotgun sequence
AEHM01000013
181 bytes
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14, whole genome shotgun sequence
AEHM01000014
139.3 KB
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15, whole genome shotgun sequence
AEHM01000015
21.2 KB
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16, whole genome shotgun sequence
AEHM01000016
26.4 KB
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17, whole genome shotgun sequence
AEHM01000017
530 bytes
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18, whole genome shotgun sequence
AEHM01000018
9.9 KB
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19, whole genome shotgun sequence
AEHM01000019
530 bytes
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20, whole genome shotgun sequence
AEHM01000020
128.5 KB
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21, whole genome shotgun sequence
AEHM01000021
117 bytes
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22, whole genome shotgun sequence
AEHM01000022
152 bytes
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23, whole genome shotgun sequence
AEHM01000023
216.1 KB
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24, whole genome shotgun sequence
AEHM01000024
40.5 KB
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25, whole genome shotgun sequence
AEHM01000025
7.3 KB
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26, whole genome shotgun sequence
AEHM01000026
8.6 KB
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27, whole genome shotgun sequence
AEHM01000027
13.5 KB
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28, whole genome shotgun sequence
AEHM01000028
60.2 KB
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29, whole genome shotgun sequence
AEHM01000029
63.4 KB
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30, whole genome shotgun sequence
AEHM01000030
158 bytes
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31, whole genome shotgun sequence
AEHM01000031
222 bytes
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32, whole genome shotgun sequence
AEHM01000032
181 bytes
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33, whole genome shotgun sequence
AEHM01000033
277.9 KB
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34, whole genome shotgun sequence
AEHM01000034
90.3 KB
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35, whole genome shotgun sequence
AEHM01000035
536.1 KB
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36, whole genome shotgun sequence
AEHM01000036
76.6 KB
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37, whole genome shotgun sequence
AEHM01000037
23.8 KB
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38, whole genome shotgun sequence
AEHM01000038
265 bytes
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39, whole genome shotgun sequence
AEHM01000039
9.0 KB
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40, whole genome shotgun sequence
AEHM01000040
1.2 KB
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41, whole genome shotgun sequence
AEHM01000041
265 bytes
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42, whole genome shotgun sequence
AEHM01000042
188 bytes
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43, whole genome shotgun sequence
AEHM01000043
13.0 KB
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44, whole genome shotgun sequence
AEHM01000044
1.2 KB
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45, whole genome shotgun sequence
AEHM01000045
68.2 KB
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46, whole genome shotgun sequence
AEHM01000046
433.6 KB
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47, whole genome shotgun sequence
AEHM01000047
173 bytes
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48, whole genome shotgun sequence
AEHM01000048
13.4 KB
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49, whole genome shotgun sequence
AEHM01000049
40.7 KB
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50, whole genome shotgun sequence
AEHM01000050
68.6 KB
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51, whole genome shotgun sequence
AEHM01000051
38.6 KB
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52, whole genome shotgun sequence
AEHM01000052
250.2 KB
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53, whole genome shotgun sequence
AEHM01000053
45.4 KB
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54, whole genome shotgun sequence
AEHM01000054
208 bytes
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55, whole genome shotgun sequence
AEHM01000055
894 bytes
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56, whole genome shotgun sequence
AEHM01000056
403 bytes
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57, whole genome shotgun sequence
AEHM01000057
152 bytes
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58, whole genome shotgun sequence
AEHM01000058
187.9 KB
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59, whole genome shotgun sequence
AEHM01000059
257.2 KB
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60, whole genome shotgun sequence
AEHM01000060
64.5 KB
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61, whole genome shotgun sequence
AEHM01000061
228.1 KB
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62, whole genome shotgun sequence
AEHM01000062
63.2 KB
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63, whole genome shotgun sequence
AEHM01000063
83.6 KB
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64, whole genome shotgun sequence
AEHM01000064
153.6 KB
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nm_1, whole genome shotgun sequence
AEHM01000065
38.6 KB
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nm_2_4, whole genome shotgun sequence
AEHM01000066
33.8 KB
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nm_3, whole genome shotgun sequence
AEHM01000067
19.5 KB
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nm_5, whole genome shotgun sequence
AEHM01000068
10.3 KB
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nm_7, whole genome shotgun sequence
AEHM01000069
6.2 KB
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nm_8, whole genome shotgun sequence
AEHM01000070
5.7 KB
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nm_9, whole genome shotgun sequence
AEHM01000071
5.5 KB
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nm_10, whole genome shotgun sequence
AEHM01000072
3.7 KB
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nm_11, whole genome shotgun sequence
AEHM01000073
2.7 KB
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nm_12, whole genome shotgun sequence
AEHM01000074
2.4 KB
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nm_13, whole genome shotgun sequence
AEHM01000075
2.3 KB
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nm_14, whole genome shotgun sequence
AEHM01000076
2.3 KB
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nm_15, whole genome shotgun sequence
AEHM01000077
2.2 KB
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nm_16, whole genome shotgun sequence
AEHM01000078
1.9 KB
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nm_17, whole genome shotgun sequence
AEHM01000079
1.8 KB
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nm_18, whole genome shotgun sequence
AEHM01000080
1.7 KB
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nm_19_26, whole genome shotgun sequence
AEHM01000081
1.7 KB
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nm_20, whole genome shotgun sequence
AEHM01000082
1.4 KB
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nm_21, whole genome shotgun sequence
AEHM01000083
1.2 KB
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nm_22, whole genome shotgun sequence
AEHM01000084
1.1 KB
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nm_23, whole genome shotgun sequence
AEHM01000085
905 bytes
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nm_24, whole genome shotgun sequence
AEHM01000086
669 bytes
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nm_25, whole genome shotgun sequence
AEHM01000087
607 bytes
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nm_27, whole genome shotgun sequence
AEHM01000088
308 bytes
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Taxonomy

External Links

Bacillus subtilis gtP20b

Search Genome

Sequences

PubMed Search for Bacillus subtilis gtP20b

Related Genomes