Bacillus subtilis subsp. spizizenii ATCC 6633

University of Illinois at Urbana-Champaign

Genome Size: 4.0 megabases, Released Date: May 17, 2010 #20155

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00001, whole genome shotgun sequence
NZ_ADGS01000001
61.8 KB
76 CDS

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contig00002, whole genome shotgun sequence
NZ_ADGS01000002
53.8 KB
61 CDS

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contig00003, whole genome shotgun sequence
NZ_ADGS01000003
166.5 KB
182 CDS

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contig00004, whole genome shotgun sequence
NZ_ADGS01000004
262.5 KB
275 CDS

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contig00005, whole genome shotgun sequence
NZ_ADGS01000005
37.9 KB
37 CDS

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contig00006, whole genome shotgun sequence
NZ_ADGS01000006
104.7 KB
97 CDS

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contig00007, whole genome shotgun sequence
NZ_ADGS01000007
231.7 KB
222 CDS

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contig00008, whole genome shotgun sequence
NZ_ADGS01000008
39.1 KB
41 CDS

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contig00009, whole genome shotgun sequence
NZ_ADGS01000009
60.5 KB
63 CDS

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contig00010, whole genome shotgun sequence
NZ_ADGS01000010
152.4 KB
150 CDS

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contig00011, whole genome shotgun sequence
NZ_ADGS01000011
53.2 KB
66 CDS

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contig00012, whole genome shotgun sequence
NZ_ADGS01000012
80.8 KB
82 CDS

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contig00013, whole genome shotgun sequence
NZ_ADGS01000013
263.1 KB
225 CDS

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contig00014, whole genome shotgun sequence
NZ_ADGS01000014
133.9 KB
134 CDS

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contig00015, whole genome shotgun sequence
NZ_ADGS01000015
56.9 KB
57 CDS

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contig00016, whole genome shotgun sequence
NZ_ADGS01000016
255.8 KB
277 CDS

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contig00017, whole genome shotgun sequence
NZ_ADGS01000017
22.6 KB
23 CDS

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contig00018, whole genome shotgun sequence
NZ_ADGS01000018
25.9 KB
21 CDS

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contig00019, whole genome shotgun sequence
NZ_ADGS01000019
146.4 KB
149 CDS

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contig00020, whole genome shotgun sequence
NZ_ADGS01000020
11.3 KB
12 CDS

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contig00021, whole genome shotgun sequence
NZ_ADGS01000021
80.0 KB
93 CDS

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contig00030, whole genome shotgun sequence
NZ_ADGS01000022
3.0 KB
0 CDS

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contig00031, whole genome shotgun sequence
NZ_ADGS01000023
146.2 KB
150 CDS

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contig00032, whole genome shotgun sequence
NZ_ADGS01000024
161.1 KB
155 CDS

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contig00036, whole genome shotgun sequence
NZ_ADGS01000025
119.4 KB
122 CDS

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contig00037, whole genome shotgun sequence
NZ_ADGS01000026
42.6 KB
54 CDS

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contig00038, whole genome shotgun sequence
NZ_ADGS01000027
319.9 KB
340 CDS

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contig00039, whole genome shotgun sequence
NZ_ADGS01000028
300.3 KB
296 CDS

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contig00040, whole genome shotgun sequence
NZ_ADGS01000029
1.6 KB
0 CDS

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contig00041, whole genome shotgun sequence
NZ_ADGS01000030
15.0 KB
16 CDS

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contig00042, whole genome shotgun sequence
NZ_ADGS01000031
81.2 KB
95 CDS

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contig00043, whole genome shotgun sequence
NZ_ADGS01000032
28.9 KB
29 CDS

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contig00044, whole genome shotgun sequence
NZ_ADGS01000033
502 bytes
0 CDS

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contig00045, whole genome shotgun sequence
NZ_ADGS01000034
58.2 KB
76 CDS

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contig00053, whole genome shotgun sequence
NZ_ADGS01000035
287.4 KB
340 CDS

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contig00054, whole genome shotgun sequence
NZ_ADGS01000036
16.8 KB
17 CDS

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contig00055, whole genome shotgun sequence
NZ_ADGS01000037
2.4 KB
5 CDS

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Taxonomy

External Links

Bacillus subtilis subsp. spizizenii ATCC 6633

Search Genome

Sequences

PubMed Search for Bacillus subtilis subsp. spizizenii ATCC 6633

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