Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1

Naval Medical Research Center

GC Content: 34.9%, Released Date: April 30, 2009 #17788

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACNH01000001
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000002
14.3 KB
16 CDS

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whole genome shotgun sequence
NZ_ACNH01000003
47.1 KB
49 CDS

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whole genome shotgun sequence
NZ_ACNH01000004
56.8 KB
74 CDS

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whole genome shotgun sequence
NZ_ACNH01000005
19.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ACNH01000006
72.1 KB
73 CDS

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whole genome shotgun sequence
NZ_ACNH01000007
9.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ACNH01000008
15.3 KB
14 CDS

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whole genome shotgun sequence
NZ_ACNH01000009
8.1 KB
7 CDS

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whole genome shotgun sequence
NZ_ACNH01000010
5.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000011
124.4 KB
116 CDS

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whole genome shotgun sequence
NZ_ACNH01000012
24.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ACNH01000013
31.4 KB
35 CDS

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whole genome shotgun sequence
NZ_ACNH01000014
18.0 KB
16 CDS

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whole genome shotgun sequence
NZ_ACNH01000015
17.1 KB
11 CDS

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whole genome shotgun sequence
NZ_ACNH01000016
182.1 KB
165 CDS

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whole genome shotgun sequence
NZ_ACNH01000017
401 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000018
352 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000019
125.9 KB
132 CDS

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whole genome shotgun sequence
NZ_ACNH01000020
5.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACNH01000021
35.0 KB
30 CDS

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whole genome shotgun sequence
NZ_ACNH01000022
17.0 KB
13 CDS

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whole genome shotgun sequence
NZ_ACNH01000023
31.1 KB
42 CDS

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whole genome shotgun sequence
NZ_ACNH01000024
20.7 KB
27 CDS

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whole genome shotgun sequence
NZ_ACNH01000025
75.5 KB
83 CDS

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whole genome shotgun sequence
NZ_ACNH01000026
65.6 KB
71 CDS

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whole genome shotgun sequence
NZ_ACNH01000027
32.8 KB
32 CDS

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whole genome shotgun sequence
NZ_ACNH01000028
122.7 KB
134 CDS

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whole genome shotgun sequence
NZ_ACNH01000029
85.6 KB
100 CDS

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whole genome shotgun sequence
NZ_ACNH01000030
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACNH01000031
92.6 KB
102 CDS

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whole genome shotgun sequence
NZ_ACNH01000032
148.9 KB
159 CDS

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whole genome shotgun sequence
NZ_ACNH01000033
9.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACNH01000034
184.1 KB
193 CDS

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whole genome shotgun sequence
NZ_ACNH01000035
31.2 KB
33 CDS

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whole genome shotgun sequence
NZ_ACNH01000036
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000037
127.4 KB
142 CDS

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whole genome shotgun sequence
NZ_ACNH01000038
44.5 KB
35 CDS

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whole genome shotgun sequence
NZ_ACNH01000039
31.8 KB
34 CDS

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whole genome shotgun sequence
NZ_ACNH01000040
22.2 KB
28 CDS

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whole genome shotgun sequence
NZ_ACNH01000041
552 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000042
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000043
74.7 KB
80 CDS

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whole genome shotgun sequence
NZ_ACNH01000044
29.5 KB
21 CDS

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whole genome shotgun sequence
NZ_ACNH01000045
46.4 KB
51 CDS

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whole genome shotgun sequence
NZ_ACNH01000046
7.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ACNH01000047
37.5 KB
38 CDS

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whole genome shotgun sequence
NZ_ACNH01000048
84.6 KB
88 CDS

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whole genome shotgun sequence
NZ_ACNH01000049
42.1 KB
46 CDS

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whole genome shotgun sequence
NZ_ACNH01000050
9.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ACNH01000051
27.5 KB
24 CDS

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whole genome shotgun sequence
NZ_ACNH01000052
142.9 KB
161 CDS

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whole genome shotgun sequence
NZ_ACNH01000053
13.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ACNH01000054
5.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ACNH01000055
155.9 KB
166 CDS

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whole genome shotgun sequence
NZ_ACNH01000056
96.1 KB
105 CDS

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whole genome shotgun sequence
NZ_ACNH01000057
3.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ACNH01000058
6.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ACNH01000059
238.2 KB
235 CDS

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whole genome shotgun sequence
NZ_ACNH01000060
71.4 KB
79 CDS

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whole genome shotgun sequence
NZ_ACNH01000061
41.5 KB
45 CDS

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whole genome shotgun sequence
NZ_ACNH01000062
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000063
33.7 KB
40 CDS

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whole genome shotgun sequence
NZ_ACNH01000064
157.8 KB
151 CDS

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whole genome shotgun sequence
NZ_ACNH01000065
11.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ACNH01000066
53.7 KB
57 CDS

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whole genome shotgun sequence
NZ_ACNH01000067
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000068
217.7 KB
215 CDS

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whole genome shotgun sequence
NZ_ACNH01000069
18.1 KB
17 CDS

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whole genome shotgun sequence
NZ_ACNH01000070
4.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000071
10.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ACNH01000072
9.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACNH01000073
171.7 KB
208 CDS

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whole genome shotgun sequence
NZ_ACNH01000074
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACNH01000075
54.5 KB
56 CDS

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whole genome shotgun sequence
NZ_ACNH01000076
4.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000077
33.4 KB
38 CDS

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whole genome shotgun sequence
NZ_ACNH01000078
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000079
69.2 KB
72 CDS

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whole genome shotgun sequence
NZ_ACNH01000080
34.0 KB
34 CDS

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whole genome shotgun sequence
NZ_ACNH01000081
62.9 KB
65 CDS

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whole genome shotgun sequence
NZ_ACNH01000082
115.2 KB
125 CDS

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whole genome shotgun sequence
NZ_ACNH01000083
70.9 KB
81 CDS

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whole genome shotgun sequence
NZ_ACNH01000084
32.8 KB
39 CDS

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whole genome shotgun sequence
NZ_ACNH01000085
96.3 KB
100 CDS

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whole genome shotgun sequence
NZ_ACNH01000086
15.0 KB
17 CDS

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whole genome shotgun sequence
NZ_ACNH01000087
2.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000088
11.6 KB
13 CDS

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whole genome shotgun sequence
NZ_ACNH01000089
56.5 KB
64 CDS

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whole genome shotgun sequence
NZ_ACNH01000090
120.0 KB
115 CDS

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whole genome shotgun sequence
NZ_ACNH01000091
94.2 KB
97 CDS

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whole genome shotgun sequence
NZ_ACNH01000092
44.3 KB
45 CDS

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whole genome shotgun sequence
NZ_ACNH01000093
10.2 KB
12 CDS

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whole genome shotgun sequence
NZ_ACNH01000094
9.0 KB
9 CDS

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whole genome shotgun sequence
NZ_ACNH01000095
5.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000096
47.3 KB
50 CDS

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whole genome shotgun sequence
NZ_ACNH01000097
7.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000098
8.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ACNH01000099
62.9 KB
65 CDS

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whole genome shotgun sequence
NZ_ACNH01000100
67.5 KB
61 CDS

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whole genome shotgun sequence
NZ_ACNH01000101
12.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ACNH01000102
12.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ACNH01000103
28.3 KB
22 CDS

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whole genome shotgun sequence
NZ_ACNH01000104
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000105
240 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000106
4.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000107
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000108
221 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000109
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000110
234 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000111
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000112
216 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000113
222 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000114
548 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000115
236 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000116
225 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000117
223 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000118
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000119
80.3 KB
94 CDS

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whole genome shotgun sequence
NZ_ACNH01000120
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000121
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000122
38.3 KB
49 CDS

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whole genome shotgun sequence
NZ_ACNH01000123
90.3 KB
106 CDS

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whole genome shotgun sequence
NZ_ACNH01000124
3.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000125
18.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ACNH01000126
20.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000127
4.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000128
11.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACNH01000129
20.7 KB
16 CDS

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whole genome shotgun sequence
NZ_ACNH01000130
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000131
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000132
815 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000133
258 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000134
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000135
237 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000136
377 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000137
20.7 KB
17 CDS

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whole genome shotgun sequence
NZ_ACNH01000138
19.3 KB
16 CDS

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whole genome shotgun sequence
NZ_ACNH01000139
3.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ACNH01000140
484 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000141
16.9 KB
24 CDS

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whole genome shotgun sequence
NZ_ACNH01000142
21.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ACNH01000143
25.8 KB
36 CDS

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whole genome shotgun sequence
NZ_ACNH01000144
1.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000145
18.1 KB
14 CDS

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whole genome shotgun sequence
NZ_ACNH01000146
240 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000147
231 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000148
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000149
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000150
353 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000151
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000152
205 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000153
203 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000154
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000155
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000156
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000157
240 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000158
241 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000159
233 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000160
218 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000161
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000162
48.4 KB
57 CDS

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whole genome shotgun sequence
NZ_ACNH01000163
73.0 KB
111 CDS

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whole genome shotgun sequence
NZ_ACNH01000164
9.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ACNH01000165
2.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ACNH01000166
2.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000167
2.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000168
39.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ACNH01000169
127.4 KB
77 CDS

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whole genome shotgun sequence
NZ_ACNH01000170
11.1 KB
8 CDS

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whole genome shotgun sequence
NZ_ACNH01000171
8.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ACNH01000172
3.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACNH01000173
97.8 KB
82 CDS

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whole genome shotgun sequence
NZ_ACNH01000174
277 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000175
335 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000176
689 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000177
210 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000178
249 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000179
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACNH01000180
235 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000181
236 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACNH01000182
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACNH01000183
14.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ACNH01000184
2.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ACNH01000185
209 bytes
0 CDS

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Taxonomy

External Links

Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1

Search Genome

Sequences

PubMed Search for Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1

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