Bacteroides fragilis 3_1_12

GC Content: 43.6%, Released Date: Jan. 30, 2009 #17801

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABZX01000001
17.5 KB
11 CDS

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whole genome shotgun sequence
NZ_ABZX01000002
105.4 KB
88 CDS

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whole genome shotgun sequence
NZ_ABZX01000003
54.1 KB
43 CDS

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whole genome shotgun sequence
NZ_ABZX01000004
167.9 KB
127 CDS

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whole genome shotgun sequence
NZ_ABZX01000005
7.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABZX01000006
30.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ABZX01000007
233.4 KB
204 CDS

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whole genome shotgun sequence
NZ_ABZX01000008
125.3 KB
94 CDS

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whole genome shotgun sequence
NZ_ABZX01000009
82.3 KB
75 CDS

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whole genome shotgun sequence
NZ_ABZX01000010
101.0 KB
129 CDS

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whole genome shotgun sequence
NZ_ABZX01000011
271.0 KB
224 CDS

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whole genome shotgun sequence
NZ_ABZX01000012
5.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABZX01000013
9.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ABZX01000014
82.4 KB
59 CDS

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whole genome shotgun sequence
NZ_ABZX01000015
30.7 KB
24 CDS

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whole genome shotgun sequence
NZ_ABZX01000016
8.8 KB
10 CDS

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whole genome shotgun sequence
NZ_ABZX01000017
77.6 KB
74 CDS

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whole genome shotgun sequence
NZ_ABZX01000018
55.0 KB
40 CDS

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whole genome shotgun sequence
NZ_ABZX01000019
266.8 KB
285 CDS

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whole genome shotgun sequence
NZ_ABZX01000020
59.2 KB
75 CDS

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whole genome shotgun sequence
NZ_ABZX01000021
2.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABZX01000022
12.5 KB
8 CDS

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whole genome shotgun sequence
NZ_ABZX01000023
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000024
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000025
16.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ABZX01000026
47.4 KB
51 CDS

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whole genome shotgun sequence
NZ_ABZX01000027
77.2 KB
76 CDS

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whole genome shotgun sequence
NZ_ABZX01000028
52.4 KB
49 CDS

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whole genome shotgun sequence
NZ_ABZX01000029
23.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ABZX01000030
55.3 KB
48 CDS

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whole genome shotgun sequence
NZ_ABZX01000031
189.6 KB
158 CDS

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whole genome shotgun sequence
NZ_ABZX01000032
7.1 KB
7 CDS

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whole genome shotgun sequence
NZ_ABZX01000033
20.5 KB
22 CDS

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whole genome shotgun sequence
NZ_ABZX01000034
179.6 KB
152 CDS

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whole genome shotgun sequence
NZ_ABZX01000035
171.0 KB
164 CDS

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whole genome shotgun sequence
NZ_ABZX01000036
127.2 KB
121 CDS

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whole genome shotgun sequence
NZ_ABZX01000037
56.6 KB
40 CDS

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whole genome shotgun sequence
NZ_ABZX01000038
242.2 KB
199 CDS

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whole genome shotgun sequence
NZ_ABZX01000039
80.8 KB
71 CDS

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whole genome shotgun sequence
NZ_ABZX01000040
2.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000041
1.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABZX01000042
36.0 KB
34 CDS

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whole genome shotgun sequence
NZ_ABZX01000043
7.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABZX01000044
196.0 KB
189 CDS

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whole genome shotgun sequence
NZ_ABZX01000045
421.4 KB
353 CDS

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whole genome shotgun sequence
NZ_ABZX01000046
23.9 KB
23 CDS

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whole genome shotgun sequence
NZ_ABZX01000047
48.8 KB
41 CDS

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whole genome shotgun sequence
NZ_ABZX01000048
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABZX01000049
15.8 KB
22 CDS

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whole genome shotgun sequence
NZ_ABZX01000050
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000051
14.4 KB
19 CDS

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whole genome shotgun sequence
NZ_ABZX01000052
4.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ABZX01000053
6.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABZX01000054
473 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000055
151.6 KB
135 CDS

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whole genome shotgun sequence
NZ_ABZX01000056
26.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ABZX01000057
46.4 KB
43 CDS

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whole genome shotgun sequence
NZ_ABZX01000058
98.5 KB
74 CDS

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whole genome shotgun sequence
NZ_ABZX01000059
113.7 KB
103 CDS

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whole genome shotgun sequence
NZ_ABZX01000060
23.9 KB
21 CDS

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whole genome shotgun sequence
NZ_ABZX01000061
56.0 KB
44 CDS

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whole genome shotgun sequence
NZ_ABZX01000062
166.6 KB
115 CDS

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whole genome shotgun sequence
NZ_ABZX01000063
3.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000064
7.3 KB
5 CDS

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whole genome shotgun sequence
NZ_ABZX01000065
19.6 KB
21 CDS

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whole genome shotgun sequence
NZ_ABZX01000066
109.6 KB
111 CDS

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whole genome shotgun sequence
NZ_ABZX01000067
141.1 KB
118 CDS

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whole genome shotgun sequence
NZ_ABZX01000068
32.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ABZX01000069
105.4 KB
103 CDS

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whole genome shotgun sequence
NZ_ABZX01000070
74.8 KB
65 CDS

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whole genome shotgun sequence
NZ_ABZX01000071
28.7 KB
22 CDS

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whole genome shotgun sequence
NZ_ABZX01000072
13.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ABZX01000073
13.5 KB
14 CDS

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whole genome shotgun sequence
NZ_ABZX01000074
44.4 KB
34 CDS

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whole genome shotgun sequence
NZ_ABZX01000075
48.2 KB
51 CDS

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whole genome shotgun sequence
NZ_ABZX01000076
20.4 KB
29 CDS

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whole genome shotgun sequence
NZ_ABZX01000077
16.6 KB
22 CDS

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whole genome shotgun sequence
NZ_ABZX01000078
3.5 KB
6 CDS

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whole genome shotgun sequence
NZ_ABZX01000079
543 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000080
3.1 KB
5 CDS

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whole genome shotgun sequence
NZ_ABZX01000081
4.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ABZX01000082
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000083
4.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABZX01000084
4.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000085
9.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ABZX01000086
4.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ABZX01000087
2.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000088
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000089
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000090
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABZX01000091
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000092
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000093
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000094
924 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000095
716 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000096
662 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000097
617 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000098
583 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000099
579 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000100
561 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABZX01000101
537 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABZX01000102
509 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABZX01000103
506 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABZX01000104
2.7 KB
4 CDS

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Taxonomy

External Links

Bacteroides fragilis 3_1_12

Search Genome

Sequences

PubMed Search for Bacteroides fragilis 3_1_12

Related Genomes