Bacteroides pectinophilus ATCC 43243

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 41.9%, Released Date: Nov. 14, 2008 #17804

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABVQ01000001
568 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000002
502 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000003
694 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000004
504 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000005
537 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000006
528 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000007
705 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000008
649 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000009
596 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000010
607 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000011
574 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000012
540 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000013
817 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000014
698 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000015
582 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000016
725 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000017
529 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000018
659 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000019
592 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000020
507 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000021
598 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000022
761 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000023
808 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABVQ01000024
869 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABVQ01000025
842 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABVQ01000026
1.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABVQ01000027
11.2 KB
14 CDS

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whole genome shotgun sequence
NZ_ABVQ01000028
12.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ABVQ01000029
14.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ABVQ01000030
24.3 KB
30 CDS

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whole genome shotgun sequence
NZ_ABVQ01000031
53.9 KB
63 CDS

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whole genome shotgun sequence
NZ_ABVQ01000032
97.2 KB
113 CDS

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whole genome shotgun sequence
NZ_ABVQ01000033
115.2 KB
115 CDS

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whole genome shotgun sequence
NZ_ABVQ01000034
259.7 KB
268 CDS

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whole genome shotgun sequence
NZ_ABVQ01000035
543.7 KB
584 CDS

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whole genome shotgun sequence
NZ_ABVQ01000036
841.5 KB
912 CDS

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whole genome shotgun sequence
NZ_ABVQ01000037
963.9 KB
1073 CDS

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Taxonomy

External Links

Bacteroides pectinophilus ATCC 43243

Search Genome

Sequences

PubMed Search for Bacteroides pectinophilus ATCC 43243

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