Bacteroides plebeius DSM 17135

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 44.3%, Released Date: June 5, 2008 #17805

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABQC02000001
5.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ABQC02000002
328.3 KB
288 CDS

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whole genome shotgun sequence
NZ_ABQC02000003
143.8 KB
115 CDS

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whole genome shotgun sequence
NZ_ABQC02000004
74.4 KB
70 CDS

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whole genome shotgun sequence
NZ_ABQC02000005
73.7 KB
54 CDS

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whole genome shotgun sequence
NZ_ABQC02000006
638 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABQC02000007
1.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABQC02000008
2.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABQC02000009
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABQC02000010
120.1 KB
84 CDS

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whole genome shotgun sequence
NZ_ABQC02000011
64.9 KB
64 CDS

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whole genome shotgun sequence
NZ_ABQC02000012
556.5 KB
543 CDS

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whole genome shotgun sequence
NZ_ABQC02000013
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABQC02000014
749 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABQC02000015
49.1 KB
72 CDS

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whole genome shotgun sequence
NZ_ABQC02000016
202.0 KB
165 CDS

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whole genome shotgun sequence
NZ_ABQC02000017
4.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ABQC02000018
72.0 KB
62 CDS

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whole genome shotgun sequence
NZ_ABQC02000019
742.4 KB
645 CDS

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whole genome shotgun sequence
NZ_ABQC02000020
216.0 KB
172 CDS

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whole genome shotgun sequence
NZ_ABQC02000021
187.8 KB
198 CDS

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whole genome shotgun sequence
NZ_ABQC02000022
144.9 KB
156 CDS

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whole genome shotgun sequence
NZ_ABQC02000023
467.3 KB
407 CDS

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whole genome shotgun sequence
NZ_ABQC02000024
705.3 KB
620 CDS

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whole genome shotgun sequence
NZ_ABQC02000025
150.1 KB
181 CDS

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Taxonomy

External Links

Bacteroides plebeius DSM 17135

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Sequences

PubMed Search for Bacteroides plebeius DSM 17135

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