Bacteroides sp. D2

GC Content: 41.7%, Released Date: March 31, 2009 #17807

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACGA01000001
88.1 KB
68 CDS

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whole genome shotgun sequence
NZ_ACGA01000002
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000003
17.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ACGA01000004
24.4 KB
14 CDS

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whole genome shotgun sequence
NZ_ACGA01000005
16.2 KB
8 CDS

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whole genome shotgun sequence
NZ_ACGA01000006
67.5 KB
53 CDS

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whole genome shotgun sequence
NZ_ACGA01000007
41.8 KB
23 CDS

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whole genome shotgun sequence
NZ_ACGA01000008
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ACGA01000009
4.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACGA01000010
30.1 KB
27 CDS

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whole genome shotgun sequence
NZ_ACGA01000011
16.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ACGA01000012
18.0 KB
20 CDS

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whole genome shotgun sequence
NZ_ACGA01000013
65.6 KB
65 CDS

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whole genome shotgun sequence
NZ_ACGA01000014
1.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ACGA01000015
17.9 KB
15 CDS

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whole genome shotgun sequence
NZ_ACGA01000016
3.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGA01000017
140.7 KB
163 CDS

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whole genome shotgun sequence
NZ_ACGA01000018
12.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ACGA01000019
25.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ACGA01000020
167.0 KB
138 CDS

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whole genome shotgun sequence
NZ_ACGA01000021
82.9 KB
63 CDS

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whole genome shotgun sequence
NZ_ACGA01000022
13.4 KB
9 CDS

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whole genome shotgun sequence
NZ_ACGA01000023
207.8 KB
150 CDS

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whole genome shotgun sequence
NZ_ACGA01000024
62.0 KB
70 CDS

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whole genome shotgun sequence
NZ_ACGA01000025
11.2 KB
9 CDS

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whole genome shotgun sequence
NZ_ACGA01000026
12.2 KB
9 CDS

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whole genome shotgun sequence
NZ_ACGA01000027
51.3 KB
49 CDS

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whole genome shotgun sequence
NZ_ACGA01000028
447.2 KB
350 CDS

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whole genome shotgun sequence
NZ_ACGA01000029
41.4 KB
39 CDS

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whole genome shotgun sequence
NZ_ACGA01000030
319.8 KB
196 CDS

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whole genome shotgun sequence
NZ_ACGA01000031
236.9 KB
178 CDS

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whole genome shotgun sequence
NZ_ACGA01000032
46.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ACGA01000033
67.4 KB
39 CDS

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whole genome shotgun sequence
NZ_ACGA01000034
121.9 KB
91 CDS

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whole genome shotgun sequence
NZ_ACGA01000035
278.9 KB
194 CDS

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whole genome shotgun sequence
NZ_ACGA01000036
4.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGA01000037
95.2 KB
69 CDS

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whole genome shotgun sequence
NZ_ACGA01000038
218.9 KB
152 CDS

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whole genome shotgun sequence
NZ_ACGA01000039
76.5 KB
55 CDS

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whole genome shotgun sequence
NZ_ACGA01000040
789 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000041
181.7 KB
138 CDS

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whole genome shotgun sequence
NZ_ACGA01000042
234.3 KB
143 CDS

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whole genome shotgun sequence
NZ_ACGA01000043
262.7 KB
168 CDS

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whole genome shotgun sequence
NZ_ACGA01000044
290.9 KB
208 CDS

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whole genome shotgun sequence
NZ_ACGA01000045
45.5 KB
38 CDS

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whole genome shotgun sequence
NZ_ACGA01000046
520.9 KB
387 CDS

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whole genome shotgun sequence
NZ_ACGA01000047
35.0 KB
31 CDS

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whole genome shotgun sequence
NZ_ACGA01000048
49.4 KB
48 CDS

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whole genome shotgun sequence
NZ_ACGA01000049
5.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACGA01000050
9.4 KB
8 CDS

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whole genome shotgun sequence
NZ_ACGA01000051
85.2 KB
68 CDS

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whole genome shotgun sequence
NZ_ACGA01000052
70.2 KB
60 CDS

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whole genome shotgun sequence
NZ_ACGA01000053
37.8 KB
25 CDS

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whole genome shotgun sequence
NZ_ACGA01000054
85.8 KB
64 CDS

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whole genome shotgun sequence
NZ_ACGA01000055
69.7 KB
51 CDS

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whole genome shotgun sequence
NZ_ACGA01000056
83.8 KB
72 CDS

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whole genome shotgun sequence
NZ_ACGA01000057
294.3 KB
224 CDS

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whole genome shotgun sequence
NZ_ACGA01000058
42.4 KB
34 CDS

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whole genome shotgun sequence
NZ_ACGA01000059
1.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGA01000060
92.5 KB
87 CDS

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whole genome shotgun sequence
NZ_ACGA01000061
76.7 KB
73 CDS

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whole genome shotgun sequence
NZ_ACGA01000062
119.2 KB
104 CDS

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whole genome shotgun sequence
NZ_ACGA01000063
63.2 KB
67 CDS

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whole genome shotgun sequence
NZ_ACGA01000064
115.8 KB
136 CDS

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whole genome shotgun sequence
NZ_ACGA01000065
6.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACGA01000066
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACGA01000067
64.6 KB
85 CDS

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whole genome shotgun sequence
NZ_ACGA01000068
14.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ACGA01000069
12.0 KB
13 CDS

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whole genome shotgun sequence
NZ_ACGA01000070
24.2 KB
27 CDS

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whole genome shotgun sequence
NZ_ACGA01000071
6.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ACGA01000072
170.1 KB
126 CDS

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whole genome shotgun sequence
NZ_ACGA01000073
90.9 KB
67 CDS

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whole genome shotgun sequence
NZ_ACGA01000074
47.1 KB
37 CDS

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whole genome shotgun sequence
NZ_ACGA01000075
123.8 KB
88 CDS

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whole genome shotgun sequence
NZ_ACGA01000076
124.0 KB
117 CDS

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whole genome shotgun sequence
NZ_ACGA01000077
5.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACGA01000078
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ACGA01000079
1.8 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000080
1.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000081
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACGA01000082
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000083
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000084
878 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000085
783 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000086
783 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACGA01000087
645 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACGA01000088
598 bytes
1 CDS

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Taxonomy

External Links

Bacteroides sp. D2

Search Genome

Sequences

PubMed Search for Bacteroides sp. D2

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