Bacteroides stercoris ATCC 43183

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 45.8%, Released Date: Oct. 3, 2007 #17808

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABFZ02000001
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFZ02000002
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFZ02000003
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFZ02000004
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABFZ02000005
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFZ02000006
3.0 KB
6 CDS

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whole genome shotgun sequence
NZ_ABFZ02000007
5.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABFZ02000008
3.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABFZ02000009
24.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ABFZ02000010
69.6 KB
59 CDS

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whole genome shotgun sequence
NZ_ABFZ02000011
64.7 KB
71 CDS

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whole genome shotgun sequence
NZ_ABFZ02000012
45.0 KB
65 CDS

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whole genome shotgun sequence
NZ_ABFZ02000013
71.2 KB
73 CDS

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whole genome shotgun sequence
NZ_ABFZ02000014
77.0 KB
67 CDS

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whole genome shotgun sequence
NZ_ABFZ02000015
63.8 KB
66 CDS

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whole genome shotgun sequence
NZ_ABFZ02000016
244.2 KB
250 CDS

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whole genome shotgun sequence
NZ_ABFZ02000017
273.5 KB
287 CDS

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whole genome shotgun sequence
NZ_ABFZ02000018
464.9 KB
479 CDS

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whole genome shotgun sequence
NZ_ABFZ02000019
573.4 KB
567 CDS

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whole genome shotgun sequence
NZ_ABFZ02000020
679.2 KB
611 CDS

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whole genome shotgun sequence
NZ_ABFZ02000021
83.5 KB
98 CDS

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whole genome shotgun sequence
NZ_ABFZ02000022
705.2 KB
634 CDS

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whole genome shotgun sequence
NZ_ABFZ02000023
457.2 KB
399 CDS

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Taxonomy

External Links

Bacteroides stercoris ATCC 43183

Search Genome

Sequences

PubMed Search for Bacteroides stercoris ATCC 43183

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