Bifidobacterium angulatum DSM 20098

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 59.4%, Released Date: Oct. 30, 2008 #17814

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABYS02000001
141.4 KB
119 CDS

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whole genome shotgun sequence
NZ_ABYS02000002
139 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABYS02000003
192.7 KB
152 CDS

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whole genome shotgun sequence
NZ_ABYS02000004
888.1 KB
804 CDS

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whole genome shotgun sequence
NZ_ABYS02000005
506 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABYS02000006
1.3 KB
2 CDS

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whole genome shotgun sequence
NZ_ABYS02000007
706 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABYS02000008
80.4 KB
75 CDS

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whole genome shotgun sequence
NZ_ABYS02000009
257.4 KB
221 CDS

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whole genome shotgun sequence
NZ_ABYS02000010
124.8 KB
132 CDS

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whole genome shotgun sequence
NZ_ABYS02000011
117 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABYS02000012
29.2 KB
19 CDS

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whole genome shotgun sequence
NZ_ABYS02000013
234.7 KB
210 CDS

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whole genome shotgun sequence
NZ_ABYS02000014
5.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ABYS02000015
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABYS02000016
724 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABYS02000017
518 bytes
1 CDS

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Taxonomy

External Links

Bifidobacterium angulatum DSM 20098

Search Genome

Sequences

PubMed Search for Bifidobacterium angulatum DSM 20098

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