Bifidobacterium animalis subsp. lactis HN019

Fonterra Research Centre

GC Content: 60.5%, Released Date: April 15, 2008 #17815

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABOT01000001
518.7 KB
458 CDS

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whole genome shotgun sequence
NZ_ABOT01000002
313.7 KB
261 CDS

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whole genome shotgun sequence
NZ_ABOT01000003
177.7 KB
129 CDS

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whole genome shotgun sequence
NZ_ABOT01000004
170.0 KB
148 CDS

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whole genome shotgun sequence
NZ_ABOT01000005
161.5 KB
145 CDS

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whole genome shotgun sequence
NZ_ABOT01000006
146.8 KB
131 CDS

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whole genome shotgun sequence
NZ_ABOT01000007
111.5 KB
90 CDS

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whole genome shotgun sequence
NZ_ABOT01000008
103.2 KB
88 CDS

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whole genome shotgun sequence
NZ_ABOT01000009
42.4 KB
30 CDS

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whole genome shotgun sequence
NZ_ABOT01000010
40.0 KB
33 CDS

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whole genome shotgun sequence
NZ_ABOT01000011
26.1 KB
17 CDS

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whole genome shotgun sequence
NZ_ABOT01000012
24.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ABOT01000013
17.8 KB
12 CDS

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whole genome shotgun sequence
NZ_ABOT01000014
5.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABOT01000015
3.6 KB
5 CDS

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whole genome shotgun sequence
NZ_ABOT01000016
2.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000017
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000018
1.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000019
243 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000020
243 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABOT01000021
243 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000022
242 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABOT01000023
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000024
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000025
241 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000026
240 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000027
237 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABOT01000028
209 bytes
1 CDS

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Taxonomy

External Links

Bifidobacterium animalis subsp. lactis HN019

Search Genome

Sequences

PubMed Search for Bifidobacterium animalis subsp. lactis HN019

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