Bifidobacterium catenulatum DSM 16992

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 56.1%, Released Date: Oct. 23, 2008 #17818

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABXY01000001
176.1 KB
163 CDS

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whole genome shotgun sequence
NZ_ABXY01000002
779 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000003
763 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000004
52.7 KB
57 CDS

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whole genome shotgun sequence
NZ_ABXY01000005
27.1 KB
25 CDS

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whole genome shotgun sequence
NZ_ABXY01000006
43.7 KB
44 CDS

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whole genome shotgun sequence
NZ_ABXY01000007
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXY01000008
11.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ABXY01000009
76.6 KB
61 CDS

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whole genome shotgun sequence
NZ_ABXY01000010
32.1 KB
32 CDS

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whole genome shotgun sequence
NZ_ABXY01000011
685.9 KB
683 CDS

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whole genome shotgun sequence
NZ_ABXY01000012
535 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000013
3.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXY01000014
14.8 KB
14 CDS

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whole genome shotgun sequence
NZ_ABXY01000015
507 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000016
143.3 KB
132 CDS

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whole genome shotgun sequence
NZ_ABXY01000017
124.2 KB
127 CDS

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whole genome shotgun sequence
NZ_ABXY01000018
4.9 KB
5 CDS

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whole genome shotgun sequence
NZ_ABXY01000019
4.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ABXY01000020
43.8 KB
35 CDS

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whole genome shotgun sequence
NZ_ABXY01000021
54.4 KB
59 CDS

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whole genome shotgun sequence
NZ_ABXY01000022
555 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXY01000023
225.8 KB
224 CDS

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whole genome shotgun sequence
NZ_ABXY01000024
3.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXY01000025
850 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000026
200.1 KB
189 CDS

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whole genome shotgun sequence
NZ_ABXY01000027
3.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXY01000028
640 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000029
28.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ABXY01000030
796 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXY01000031
43.7 KB
44 CDS

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Taxonomy

External Links

Bifidobacterium catenulatum DSM 16992

Search Genome

Sequences

PubMed Search for Bifidobacterium catenulatum DSM 16992

Related Genomes