Bifidobacterium pseudocatenulatum DSM 20438

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 56.3%, Released Date: Oct. 23, 2008 #17823

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABXX02000001
601.5 KB
577 CDS

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whole genome shotgun sequence
NZ_ABXX02000002
557.4 KB
494 CDS

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whole genome shotgun sequence
NZ_ABXX02000003
529.6 KB
547 CDS

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whole genome shotgun sequence
NZ_ABXX02000004
172.5 KB
163 CDS

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whole genome shotgun sequence
NZ_ABXX02000005
140.9 KB
125 CDS

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whole genome shotgun sequence
NZ_ABXX02000006
111.6 KB
104 CDS

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whole genome shotgun sequence
NZ_ABXX02000007
86.3 KB
79 CDS

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whole genome shotgun sequence
NZ_ABXX02000008
19.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ABXX02000009
3.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABXX02000010
2.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXX02000011
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXX02000012
1.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXX02000013
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000014
1.6 KB
4 CDS

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whole genome shotgun sequence
NZ_ABXX02000015
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABXX02000016
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000017
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABXX02000018
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000019
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABXX02000020
1.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000021
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABXX02000022
1016 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXX02000023
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000024
865 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXX02000025
842 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXX02000026
865 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000027
840 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXX02000028
807 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000029
723 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000030
701 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000031
622 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABXX02000032
534 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABXX02000033
522 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXX02000034
523 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXX02000035
524 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABXX02000036
508 bytes
0 CDS

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Taxonomy

External Links

Bifidobacterium pseudocatenulatum DSM 20438

Search Genome

Sequences

PubMed Search for Bifidobacterium pseudocatenulatum DSM 20438

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