Blastopirellula marina DSM 3645

J. Craig Venter Institute

Genome Size: 5.0 megabases, GC Content: 57.0%, Released Date: Feb. 15, 2006 #17824

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AANZ01000001
493.8 KB
465 CDS

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whole genome shotgun sequence
NZ_AANZ01000002
367.2 KB
339 CDS

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whole genome shotgun sequence
NZ_AANZ01000003
317.9 KB
292 CDS

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whole genome shotgun sequence
NZ_AANZ01000004
299.6 KB
276 CDS

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whole genome shotgun sequence
NZ_AANZ01000005
289.1 KB
278 CDS

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whole genome shotgun sequence
NZ_AANZ01000006
279.5 KB
252 CDS

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whole genome shotgun sequence
NZ_AANZ01000007
275.0 KB
271 CDS

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whole genome shotgun sequence
NZ_AANZ01000008
224.3 KB
192 CDS

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whole genome shotgun sequence
NZ_AANZ01000009
223.1 KB
187 CDS

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whole genome shotgun sequence
NZ_AANZ01000010
207.2 KB
179 CDS

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whole genome shotgun sequence
NZ_AANZ01000011
202.4 KB
171 CDS

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whole genome shotgun sequence
NZ_AANZ01000012
197.9 KB
179 CDS

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whole genome shotgun sequence
NZ_AANZ01000013
176.5 KB
150 CDS

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whole genome shotgun sequence
NZ_AANZ01000014
175.5 KB
392 CDS

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whole genome shotgun sequence
NZ_AANZ01000015
166.5 KB
124 CDS

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whole genome shotgun sequence
NZ_AANZ01000016
152.6 KB
130 CDS

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whole genome shotgun sequence
NZ_AANZ01000017
151.7 KB
109 CDS

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whole genome shotgun sequence
NZ_AANZ01000018
146.8 KB
139 CDS

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whole genome shotgun sequence
NZ_AANZ01000019
144.3 KB
137 CDS

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whole genome shotgun sequence
NZ_AANZ01000020
140.9 KB
101 CDS

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whole genome shotgun sequence
NZ_AANZ01000021
132.9 KB
121 CDS

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whole genome shotgun sequence
NZ_AANZ01000022
119.4 KB
119 CDS

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whole genome shotgun sequence
NZ_AANZ01000023
113.0 KB
104 CDS

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whole genome shotgun sequence
NZ_AANZ01000024
96.0 KB
93 CDS

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whole genome shotgun sequence
NZ_AANZ01000025
95.4 KB
88 CDS

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whole genome shotgun sequence
NZ_AANZ01000026
94.0 KB
78 CDS

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whole genome shotgun sequence
NZ_AANZ01000027
93.4 KB
80 CDS

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whole genome shotgun sequence
NZ_AANZ01000028
89.4 KB
86 CDS

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whole genome shotgun sequence
NZ_AANZ01000029
80.9 KB
68 CDS

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whole genome shotgun sequence
NZ_AANZ01000030
79.0 KB
64 CDS

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whole genome shotgun sequence
NZ_AANZ01000031
79.0 KB
53 CDS

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whole genome shotgun sequence
NZ_AANZ01000032
70.4 KB
54 CDS

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whole genome shotgun sequence
NZ_AANZ01000033
59.0 KB
54 CDS

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whole genome shotgun sequence
NZ_AANZ01000034
58.3 KB
54 CDS

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whole genome shotgun sequence
NZ_AANZ01000035
55.9 KB
23 CDS

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whole genome shotgun sequence
NZ_AANZ01000036
51.0 KB
39 CDS

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whole genome shotgun sequence
NZ_AANZ01000037
47.5 KB
50 CDS

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whole genome shotgun sequence
NZ_AANZ01000038
37.2 KB
26 CDS

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whole genome shotgun sequence
NZ_AANZ01000039
35.9 KB
30 CDS

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whole genome shotgun sequence
NZ_AANZ01000040
35.8 KB
33 CDS

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whole genome shotgun sequence
NZ_AANZ01000041
35.0 KB
35 CDS

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whole genome shotgun sequence
NZ_AANZ01000042
30.8 KB
36 CDS

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whole genome shotgun sequence
NZ_AANZ01000043
29.4 KB
30 CDS

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whole genome shotgun sequence
NZ_AANZ01000044
27.9 KB
22 CDS

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whole genome shotgun sequence
NZ_AANZ01000045
27.6 KB
25 CDS

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whole genome shotgun sequence
NZ_AANZ01000046
23.4 KB
22 CDS

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whole genome shotgun sequence
NZ_AANZ01000047
22.3 KB
27 CDS

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whole genome shotgun sequence
NZ_AANZ01000048
21.8 KB
20 CDS

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whole genome shotgun sequence
NZ_AANZ01000049
17.9 KB
16 CDS

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whole genome shotgun sequence
NZ_AANZ01000050
16.5 KB
16 CDS

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whole genome shotgun sequence
NZ_AANZ01000051
13.1 KB
14 CDS

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whole genome shotgun sequence
NZ_AANZ01000052
10.9 KB
11 CDS

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whole genome shotgun sequence
NZ_AANZ01000053
10.9 KB
10 CDS

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whole genome shotgun sequence
NZ_AANZ01000054
8.6 KB
3 CDS

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whole genome shotgun sequence
NZ_AANZ01000055
8.5 KB
12 CDS

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whole genome shotgun sequence
NZ_AANZ01000056
7.5 KB
11 CDS

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whole genome shotgun sequence
NZ_AANZ01000057
6.3 KB
8 CDS

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whole genome shotgun sequence
NZ_AANZ01000058
6.2 KB
6 CDS

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whole genome shotgun sequence
NZ_AANZ01000059
4.4 KB
3 CDS

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whole genome shotgun sequence
NZ_AANZ01000060
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_AANZ01000061
2.9 KB
5 CDS

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whole genome shotgun sequence
NZ_AANZ01000062
2.7 KB
3 CDS

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whole genome shotgun sequence
NZ_AANZ01000063
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_AANZ01000064
1.9 KB
3 CDS

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Taxonomy

External Links

Blastopirellula marina DSM 3645

Search Genome

Sequences

PubMed Search for Blastopirellula marina DSM 3645

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