Blattabacterium sp. (Periplaneta americana) str. BPLAN

NCBI

Genome Size: 0.64 megabases, Released Date: Oct. 19, 2009 #16741

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
NC_013418
622.1 KB
576 CDS

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Circular View
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plasmid pBPLAN
NC_013419
3.4 KB
4 CDS

Table view
Circular View
Artemis Viewer

References

Nitrogen recycling and nutritional provisioning by Blattabacterium, the cockroach endosymbiont
Sabree,Z.L., Kambhampati,S. and Moran,N.A. Proc. Natl. Acad. Sci. U.S.A. 106 (46), 19521-19526 (2009)
PubMed, PubGet, HubMed

Taxonomy

External Links

Blattabacterium sp. (Periplaneta americana) str. BPLAN

Search Genome

Sequences

References

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