Borrelia burgdorferi Bol26

J. Craig Venter Institute

Genome Size: 0.3 megabases, GC Content: 28.6%, Released Date: June 26, 2007 #17835

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABCW02000001
85.4 KB
63 CDS

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whole genome shotgun sequence
NZ_ABCW02000002
175.3 KB
171 CDS

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whole genome shotgun sequence
NZ_ABCW02000003
460.2 KB
434 CDS

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whole genome shotgun sequence
NZ_ABCW02000004
167.0 KB
163 CDS

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whole genome shotgun sequence
NZ_ABCW02000005
18.7 KB
31 CDS

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whole genome shotgun sequence
NZ_ABCW02000006
2.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABCW02000007
28.2 KB
39 CDS

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whole genome shotgun sequence
NZ_ABCW02000008
17.8 KB
24 CDS

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whole genome shotgun sequence
NZ_ABCW02000009
11.0 KB
17 CDS

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whole genome shotgun sequence
NZ_ABCW02000010
29.8 KB
43 CDS

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Taxonomy

External Links

Borrelia burgdorferi Bol26

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Sequences

PubMed Search for Borrelia burgdorferi Bol26

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