Borrelia burgdorferi ZS7

J. Craig Venter Institute , MSC

Genome Size: 1.35 megabases, GC Content: 28.3%, Released Date: Dec. 17, 2008 #16749

Completed genome

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Annotation search: search for genes and features in this genome

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Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

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Allow mismatched bases

Sequences

complete genome
NC_011728
885.5 KB
808 CDS

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plasmid ZS7_cp26
NC_011724
25.9 KB
25 CDS

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plasmid ZS7_cp32-1
NC_011731
29.6 KB
36 CDS

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plasmid ZS7_cp32-12
NC_011735
29.1 KB
39 CDS

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plasmid ZS7_cp32-3+10
NC_011720
47.0 KB
60 CDS

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plasmid ZS7_cp32-4
NC_011736
30.2 KB
40 CDS

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plasmid ZS7_cp32-9
NC_011722
29.8 KB
35 CDS

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plasmid ZS7_lp17
NC_011782
16.9 KB
14 CDS

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plasmid ZS7_lp25
NC_011783
23.8 KB
17 CDS

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plasmid ZS7_lp28-1
NC_011780
22.9 KB
13 CDS

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plasmid ZS7_lp28-2
NC_011779
29.1 KB
31 CDS

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plasmid ZS7_lp28-3
NC_011781
27.7 KB
22 CDS

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plasmid ZS7_lp28-4
NC_011785
28.2 KB
21 CDS

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plasmid ZS7_lp36
NC_011778
36.0 KB
23 CDS

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plasmid ZS7_lp54
NC_011784
52.4 KB
55 CDS

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Taxonomy

External Links

Borrelia burgdorferi ZS7

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Sequences

PubMed Search for Borrelia burgdorferi ZS7

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