Borrelia garinii Far04

J. Craig Venter Institute

Genome Size: 0.24 megabases, GC Content: 27.9%, Released Date: May 13, 2008 #17838

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABPZ02000001
200.2 KB
192 CDS

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whole genome shotgun sequence
NZ_ABPZ02000002
121.6 KB
129 CDS

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whole genome shotgun sequence
NZ_ABPZ02000003
90.8 KB
86 CDS

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whole genome shotgun sequence
NZ_ABPZ02000004
72.2 KB
69 CDS

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whole genome shotgun sequence
NZ_ABPZ02000005
42.6 KB
50 CDS

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whole genome shotgun sequence
NZ_ABPZ02000006
37.3 KB
38 CDS

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whole genome shotgun sequence
NZ_ABPZ02000007
34.2 KB
32 CDS

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whole genome shotgun sequence
NZ_ABPZ02000008
30.2 KB
32 CDS

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whole genome shotgun sequence
NZ_ABPZ02000009
28.1 KB
21 CDS

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whole genome shotgun sequence
NZ_ABPZ02000010
26.9 KB
33 CDS

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whole genome shotgun sequence
NZ_ABPZ02000011
26.5 KB
19 CDS

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whole genome shotgun sequence
NZ_ABPZ02000012
25.4 KB
31 CDS

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whole genome shotgun sequence
NZ_ABPZ02000013
25.3 KB
26 CDS

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whole genome shotgun sequence
NZ_ABPZ02000014
18.5 KB
16 CDS

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whole genome shotgun sequence
NZ_ABPZ02000015
17.8 KB
13 CDS

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whole genome shotgun sequence
NZ_ABPZ02000016
16.5 KB
16 CDS

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whole genome shotgun sequence
NZ_ABPZ02000017
11.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ABPZ02000018
5.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ABPZ02000019
4.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ABPZ02000020
3.9 KB
4 CDS

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whole genome shotgun sequence
NZ_ABPZ02000021
3.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABPZ02000022
3.0 KB
5 CDS

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whole genome shotgun sequence
NZ_ABPZ02000023
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABPZ02000024
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABPZ02000025
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABPZ02000026
2.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ABPZ02000027
2.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABPZ02000028
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABPZ02000029
1.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABPZ02000030
1.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ABPZ02000031
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABPZ02000032
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABPZ02000033
922 bytes
2 CDS

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Taxonomy

External Links

Borrelia garinii Far04

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Sequences

PubMed Search for Borrelia garinii Far04

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