Borrelia spielmanii A14S

J. Craig Venter Institute

Genome Size: 0.24 megabases, GC Content: 27.7%, Released Date: Feb. 6, 2008 #17841

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABKB02000001
76.7 KB
56 CDS

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whole genome shotgun sequence
NZ_ABKB02000002
6.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABKB02000003
266.6 KB
251 CDS

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whole genome shotgun sequence
NZ_ABKB02000004
861 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABKB02000005
174.7 KB
166 CDS

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whole genome shotgun sequence
NZ_ABKB02000006
864 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKB02000007
41.8 KB
36 CDS

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whole genome shotgun sequence
NZ_ABKB02000008
796 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKB02000009
190.8 KB
179 CDS

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whole genome shotgun sequence
NZ_ABKB02000010
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000011
6.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABKB02000012
115.3 KB
117 CDS

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whole genome shotgun sequence
NZ_ABKB02000013
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ABKB02000014
904 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000015
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABKB02000016
5.8 KB
6 CDS

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whole genome shotgun sequence
NZ_ABKB02000017
1.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000018
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000019
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABKB02000020
761 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABKB02000021
2.7 KB
6 CDS

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whole genome shotgun sequence
NZ_ABKB02000022
966 bytes
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000023
3.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ABKB02000024
2.8 KB
5 CDS

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whole genome shotgun sequence
NZ_ABKB02000025
12.0 KB
19 CDS

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whole genome shotgun sequence
NZ_ABKB02000026
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABKB02000027
3.7 KB
4 CDS

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whole genome shotgun sequence
NZ_ABKB02000028
18.3 KB
29 CDS

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whole genome shotgun sequence
NZ_ABKB02000029
3.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ABKB02000030
1.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000031
8.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ABKB02000032
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ABKB02000033
1.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000034
4.5 KB
5 CDS

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whole genome shotgun sequence
NZ_ABKB02000035
1.5 KB
4 CDS

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whole genome shotgun sequence
NZ_ABKB02000036
10.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ABKB02000037
1.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ABKB02000038
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABKB02000039
2.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABKB02000040
3.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABKB02000041
1.3 KB
2 CDS

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Taxonomy

External Links

Borrelia spielmanii A14S

Search Genome

Sequences

PubMed Search for Borrelia spielmanii A14S

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