Brevibacterium linens BL2

DOE Joint Genome Institute

GC Content: 62.8%, Released Date: April 7, 2005 #17844

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AAGP01000001
251.4 KB
226 CDS

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whole genome shotgun sequence
NZ_AAGP01000002
181.5 KB
168 CDS

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whole genome shotgun sequence
NZ_AAGP01000003
177.8 KB
150 CDS

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whole genome shotgun sequence
NZ_AAGP01000004
164.4 KB
161 CDS

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whole genome shotgun sequence
NZ_AAGP01000005
133.8 KB
141 CDS

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whole genome shotgun sequence
NZ_AAGP01000006
123.3 KB
115 CDS

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whole genome shotgun sequence
NZ_AAGP01000007
112.8 KB
124 CDS

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whole genome shotgun sequence
NZ_AAGP01000008
112.3 KB
96 CDS

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whole genome shotgun sequence
NZ_AAGP01000009
111.6 KB
110 CDS

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whole genome shotgun sequence
NZ_AAGP01000010
101.4 KB
94 CDS

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whole genome shotgun sequence
NZ_AAGP01000011
97.8 KB
85 CDS

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whole genome shotgun sequence
NZ_AAGP01000012
95.7 KB
85 CDS

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whole genome shotgun sequence
NZ_AAGP01000013
93.9 KB
74 CDS

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whole genome shotgun sequence
NZ_AAGP01000014
89.8 KB
93 CDS

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whole genome shotgun sequence
NZ_AAGP01000015
87.3 KB
78 CDS

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whole genome shotgun sequence
NZ_AAGP01000016
86.7 KB
75 CDS

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whole genome shotgun sequence
NZ_AAGP01000017
85.9 KB
77 CDS

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whole genome shotgun sequence
NZ_AAGP01000018
81.2 KB
71 CDS

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whole genome shotgun sequence
NZ_AAGP01000019
78.8 KB
82 CDS

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whole genome shotgun sequence
NZ_AAGP01000020
75.8 KB
72 CDS

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whole genome shotgun sequence
NZ_AAGP01000021
75.2 KB
83 CDS

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whole genome shotgun sequence
NZ_AAGP01000022
71.9 KB
63 CDS

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whole genome shotgun sequence
NZ_AAGP01000023
71.6 KB
64 CDS

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whole genome shotgun sequence
NZ_AAGP01000024
71.5 KB
57 CDS

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whole genome shotgun sequence
NZ_AAGP01000025
69.9 KB
64 CDS

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whole genome shotgun sequence
NZ_AAGP01000026
68.7 KB
59 CDS

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whole genome shotgun sequence
NZ_AAGP01000027
64.5 KB
58 CDS

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whole genome shotgun sequence
NZ_AAGP01000028
61.9 KB
55 CDS

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whole genome shotgun sequence
NZ_AAGP01000029
60.6 KB
57 CDS

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whole genome shotgun sequence
NZ_AAGP01000030
60.5 KB
58 CDS

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whole genome shotgun sequence
NZ_AAGP01000031
57.2 KB
54 CDS

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whole genome shotgun sequence
NZ_AAGP01000032
56.9 KB
50 CDS

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whole genome shotgun sequence
NZ_AAGP01000033
55.4 KB
50 CDS

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whole genome shotgun sequence
NZ_AAGP01000034
53.9 KB
50 CDS

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whole genome shotgun sequence
NZ_AAGP01000035
53.7 KB
42 CDS

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whole genome shotgun sequence
NZ_AAGP01000036
52.6 KB
49 CDS

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whole genome shotgun sequence
NZ_AAGP01000037
50.7 KB
50 CDS

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whole genome shotgun sequence
NZ_AAGP01000038
47.6 KB
45 CDS

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whole genome shotgun sequence
NZ_AAGP01000039
45.0 KB
42 CDS

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whole genome shotgun sequence
NZ_AAGP01000040
44.5 KB
45 CDS

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whole genome shotgun sequence
NZ_AAGP01000041
43.4 KB
47 CDS

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whole genome shotgun sequence
NZ_AAGP01000042
41.2 KB
47 CDS

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whole genome shotgun sequence
NZ_AAGP01000043
38.0 KB
42 CDS

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whole genome shotgun sequence
NZ_AAGP01000044
36.6 KB
39 CDS

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whole genome shotgun sequence
NZ_AAGP01000045
36.6 KB
35 CDS

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whole genome shotgun sequence
NZ_AAGP01000046
36.0 KB
39 CDS

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whole genome shotgun sequence
NZ_AAGP01000047
35.1 KB
37 CDS

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whole genome shotgun sequence
NZ_AAGP01000048
32.0 KB
38 CDS

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whole genome shotgun sequence
NZ_AAGP01000049
31.3 KB
33 CDS

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whole genome shotgun sequence
NZ_AAGP01000050
28.6 KB
32 CDS

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whole genome shotgun sequence
NZ_AAGP01000051
28.4 KB
28 CDS

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whole genome shotgun sequence
NZ_AAGP01000052
26.6 KB
28 CDS

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whole genome shotgun sequence
NZ_AAGP01000053
26.1 KB
22 CDS

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whole genome shotgun sequence
NZ_AAGP01000054
24.4 KB
21 CDS

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whole genome shotgun sequence
NZ_AAGP01000055
23.5 KB
17 CDS

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whole genome shotgun sequence
NZ_AAGP01000056
22.9 KB
26 CDS

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whole genome shotgun sequence
NZ_AAGP01000057
22.6 KB
20 CDS

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whole genome shotgun sequence
NZ_AAGP01000058
21.4 KB
25 CDS

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whole genome shotgun sequence
NZ_AAGP01000059
20.8 KB
17 CDS

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whole genome shotgun sequence
NZ_AAGP01000060
19.7 KB
20 CDS

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whole genome shotgun sequence
NZ_AAGP01000061
16.4 KB
14 CDS

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whole genome shotgun sequence
NZ_AAGP01000062
16.3 KB
12 CDS

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whole genome shotgun sequence
NZ_AAGP01000063
14.9 KB
15 CDS

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whole genome shotgun sequence
NZ_AAGP01000064
10.7 KB
13 CDS

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whole genome shotgun sequence
NZ_AAGP01000065
9.4 KB
15 CDS

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whole genome shotgun sequence
NZ_AAGP01000066
9.3 KB
8 CDS

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whole genome shotgun sequence
NZ_AAGP01000067
8.6 KB
15 CDS

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whole genome shotgun sequence
NZ_AAGP01000068
8.5 KB
13 CDS

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whole genome shotgun sequence
NZ_AAGP01000069
8.4 KB
13 CDS

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whole genome shotgun sequence
NZ_AAGP01000070
6.1 KB
6 CDS

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whole genome shotgun sequence
NZ_AAGP01000071
5.4 KB
7 CDS

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whole genome shotgun sequence
NZ_AAGP01000072
5.0 KB
6 CDS

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whole genome shotgun sequence
NZ_AAGP01000073
4.9 KB
8 CDS

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whole genome shotgun sequence
NZ_AAGP01000074
3.2 KB
5 CDS

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whole genome shotgun sequence
NZ_AAGP01000075
2.7 KB
5 CDS

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whole genome shotgun sequence
NZ_AAGP01000076
2.3 KB
4 CDS

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Taxonomy

External Links

Brevibacterium linens BL2

Search Genome

Sequences

PubMed Search for Brevibacterium linens BL2

Related Genomes