Brucella ceti M13/05/1

Broad Institute

GC Content: 57.3%, Released Date: Jan. 23, 2009 #17852

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACBP01000001
9.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ACBP01000002
81.2 KB
63 CDS

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whole genome shotgun sequence
NZ_ACBP01000003
27.9 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBP01000004
41.9 KB
36 CDS

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whole genome shotgun sequence
NZ_ACBP01000005
16.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBP01000006
22.1 KB
22 CDS

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whole genome shotgun sequence
NZ_ACBP01000007
27.2 KB
27 CDS

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whole genome shotgun sequence
NZ_ACBP01000008
11.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ACBP01000009
9.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBP01000010
5.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ACBP01000011
4.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000012
18.8 KB
17 CDS

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whole genome shotgun sequence
NZ_ACBP01000013
27.3 KB
25 CDS

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whole genome shotgun sequence
NZ_ACBP01000014
27.8 KB
30 CDS

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whole genome shotgun sequence
NZ_ACBP01000015
3.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000016
23.1 KB
18 CDS

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whole genome shotgun sequence
NZ_ACBP01000017
8.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBP01000018
13.3 KB
9 CDS

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whole genome shotgun sequence
NZ_ACBP01000019
74.8 KB
70 CDS

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whole genome shotgun sequence
NZ_ACBP01000020
87.2 KB
84 CDS

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whole genome shotgun sequence
NZ_ACBP01000021
49.5 KB
47 CDS

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whole genome shotgun sequence
NZ_ACBP01000022
18.5 KB
17 CDS

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whole genome shotgun sequence
NZ_ACBP01000023
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000024
3.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBP01000025
8.3 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBP01000026
60.9 KB
53 CDS

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whole genome shotgun sequence
NZ_ACBP01000027
79.2 KB
74 CDS

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whole genome shotgun sequence
NZ_ACBP01000028
83.5 KB
73 CDS

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whole genome shotgun sequence
NZ_ACBP01000029
43.1 KB
38 CDS

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whole genome shotgun sequence
NZ_ACBP01000030
71.6 KB
62 CDS

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whole genome shotgun sequence
NZ_ACBP01000031
41.9 KB
35 CDS

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whole genome shotgun sequence
NZ_ACBP01000032
18.7 KB
20 CDS

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whole genome shotgun sequence
NZ_ACBP01000033
44.7 KB
47 CDS

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whole genome shotgun sequence
NZ_ACBP01000034
17.2 KB
20 CDS

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whole genome shotgun sequence
NZ_ACBP01000035
20.3 KB
19 CDS

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whole genome shotgun sequence
NZ_ACBP01000036
43.9 KB
40 CDS

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whole genome shotgun sequence
NZ_ACBP01000037
79.7 KB
73 CDS

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whole genome shotgun sequence
NZ_ACBP01000038
25.1 KB
27 CDS

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whole genome shotgun sequence
NZ_ACBP01000039
40.9 KB
41 CDS

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whole genome shotgun sequence
NZ_ACBP01000040
190.8 KB
181 CDS

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whole genome shotgun sequence
NZ_ACBP01000041
4.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ACBP01000042
23.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ACBP01000043
1.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACBP01000044
9.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ACBP01000045
74.1 KB
61 CDS

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whole genome shotgun sequence
NZ_ACBP01000046
110.8 KB
109 CDS

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whole genome shotgun sequence
NZ_ACBP01000047
24.2 KB
31 CDS

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whole genome shotgun sequence
NZ_ACBP01000048
25.8 KB
25 CDS

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whole genome shotgun sequence
NZ_ACBP01000049
25.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ACBP01000050
14.1 KB
12 CDS

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whole genome shotgun sequence
NZ_ACBP01000051
22.7 KB
21 CDS

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whole genome shotgun sequence
NZ_ACBP01000052
34.7 KB
34 CDS

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whole genome shotgun sequence
NZ_ACBP01000053
121.1 KB
122 CDS

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whole genome shotgun sequence
NZ_ACBP01000054
3.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACBP01000055
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000056
26.1 KB
24 CDS

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whole genome shotgun sequence
NZ_ACBP01000057
16.8 KB
18 CDS

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whole genome shotgun sequence
NZ_ACBP01000058
31.5 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBP01000059
13.2 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBP01000060
32.0 KB
27 CDS

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whole genome shotgun sequence
NZ_ACBP01000061
26.0 KB
26 CDS

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whole genome shotgun sequence
NZ_ACBP01000062
12.3 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBP01000063
34.8 KB
33 CDS

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whole genome shotgun sequence
NZ_ACBP01000064
46.2 KB
44 CDS

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whole genome shotgun sequence
NZ_ACBP01000065
2.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000066
72.0 KB
75 CDS

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whole genome shotgun sequence
NZ_ACBP01000067
51.3 KB
47 CDS

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whole genome shotgun sequence
NZ_ACBP01000068
2.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACBP01000069
29.4 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBP01000070
16.6 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBP01000071
25.8 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBP01000072
5.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ACBP01000073
804 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACBP01000074
7.0 KB
9 CDS

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whole genome shotgun sequence
NZ_ACBP01000075
44.3 KB
39 CDS

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whole genome shotgun sequence
NZ_ACBP01000076
7.2 KB
9 CDS

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whole genome shotgun sequence
NZ_ACBP01000077
10.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACBP01000078
26.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ACBP01000079
43.0 KB
31 CDS

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whole genome shotgun sequence
NZ_ACBP01000080
10.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBP01000081
11.5 KB
9 CDS

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whole genome shotgun sequence
NZ_ACBP01000082
15.3 KB
16 CDS

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whole genome shotgun sequence
NZ_ACBP01000083
43.1 KB
36 CDS

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whole genome shotgun sequence
NZ_ACBP01000084
29.1 KB
33 CDS

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whole genome shotgun sequence
NZ_ACBP01000085
15.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ACBP01000086
50.2 KB
50 CDS

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whole genome shotgun sequence
NZ_ACBP01000087
22.8 KB
30 CDS

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whole genome shotgun sequence
NZ_ACBP01000088
79.6 KB
69 CDS

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whole genome shotgun sequence
NZ_ACBP01000089
11.3 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBP01000090
3.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACBP01000091
3.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000092
2.9 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000093
12.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBP01000094
44.0 KB
38 CDS

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whole genome shotgun sequence
NZ_ACBP01000095
67.2 KB
63 CDS

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whole genome shotgun sequence
NZ_ACBP01000096
20.9 KB
34 CDS

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whole genome shotgun sequence
NZ_ACBP01000097
16.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ACBP01000098
5.3 KB
6 CDS

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whole genome shotgun sequence
NZ_ACBP01000099
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000100
112.7 KB
118 CDS

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whole genome shotgun sequence
NZ_ACBP01000101
35.6 KB
30 CDS

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whole genome shotgun sequence
NZ_ACBP01000102
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ACBP01000103
4.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000104
774 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000105
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000106
3.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000107
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000108
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000109
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBP01000110
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000111
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACBP01000112
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000113
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACBP01000114
944 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000115
767 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACBP01000116
722 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000117
609 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBP01000118
572 bytes
2 CDS

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Taxonomy

External Links

Brucella ceti M13/05/1

Search Genome

Sequences

PubMed Search for Brucella ceti M13/05/1

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