Brucella melitensis biovar Abortus 2308

Oak Ridge National Laboratory

Genome Size: 3.32 megabases, GC Content: 57.2%, Released Date: Nov. 22, 2005 #16765

Completed genome

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

chromosome I
NC_007618
2.0 MB
2000 CDS

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chromosome II, complete genome
NC_007624
1.1 MB
1034 CDS

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Circular View
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References

Whole-genome analyses of speciation events in pathogenic brucellae
Chain,P.S., Comerci,D.J., Tolmasky,M.E., Larimer,F.W., Malfatti,S.A., Vergez,L.M., Aguero,F., Land,M.L., Ugalde,R.A. and Garcia,E. Infect. Immun. 73 (12), 8353-8361 (2005)
PubMed, PubGet, HubMed

Taxonomy

External Links

Brucella melitensis biovar Abortus 2308

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Sequences

References

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