Brucella neotomae 5K33

Broad Institute

Genome Size: 0.01 megabases, GC Content: 57.3%, Released Date: Feb. 18, 2009 #17859

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACEH01000001
45.0 KB
41 CDS

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whole genome shotgun sequence
NZ_ACEH01000002
102.1 KB
104 CDS

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whole genome shotgun sequence
NZ_ACEH01000003
111.7 KB
98 CDS

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whole genome shotgun sequence
NZ_ACEH01000004
2.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ACEH01000005
31.6 KB
28 CDS

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whole genome shotgun sequence
NZ_ACEH01000006
11.2 KB
9 CDS

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whole genome shotgun sequence
NZ_ACEH01000007
11.4 KB
10 CDS

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whole genome shotgun sequence
NZ_ACEH01000008
163.1 KB
149 CDS

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whole genome shotgun sequence
NZ_ACEH01000009
3.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ACEH01000010
66.9 KB
60 CDS

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whole genome shotgun sequence
NZ_ACEH01000011
10.4 KB
11 CDS

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whole genome shotgun sequence
NZ_ACEH01000012
243.8 KB
216 CDS

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whole genome shotgun sequence
NZ_ACEH01000013
51.3 KB
56 CDS

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whole genome shotgun sequence
NZ_ACEH01000014
46.9 KB
44 CDS

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whole genome shotgun sequence
NZ_ACEH01000015
31.8 KB
34 CDS

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whole genome shotgun sequence
NZ_ACEH01000016
49.4 KB
48 CDS

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whole genome shotgun sequence
NZ_ACEH01000017
170.7 KB
149 CDS

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whole genome shotgun sequence
NZ_ACEH01000018
6.3 KB
7 CDS

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whole genome shotgun sequence
NZ_ACEH01000019
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACEH01000020
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ACEH01000021
895 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACEH01000022
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEH01000023
592 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACEH01000024
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACEH01000025
3.7 KB
2 CDS

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whole genome shotgun sequence
NZ_ACEH01000026
29.6 KB
26 CDS

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whole genome shotgun sequence
NZ_ACEH01000027
17.7 KB
20 CDS

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whole genome shotgun sequence
NZ_ACEH01000028
28.7 KB
26 CDS

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whole genome shotgun sequence
NZ_ACEH01000029
25.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ACEH01000030
37.7 KB
39 CDS

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whole genome shotgun sequence
NZ_ACEH01000031
194.0 KB
183 CDS

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whole genome shotgun sequence
NZ_ACEH01000032
27.3 KB
24 CDS

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whole genome shotgun sequence
NZ_ACEH01000033
7.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACEH01000034
53.5 KB
47 CDS

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whole genome shotgun sequence
NZ_ACEH01000035
22.9 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEH01000036
135.6 KB
138 CDS

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whole genome shotgun sequence
NZ_ACEH01000037
89.0 KB
76 CDS

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whole genome shotgun sequence
NZ_ACEH01000038
36.4 KB
36 CDS

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whole genome shotgun sequence
NZ_ACEH01000039
69.2 KB
71 CDS

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whole genome shotgun sequence
NZ_ACEH01000040
51.7 KB
53 CDS

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whole genome shotgun sequence
NZ_ACEH01000041
17.3 KB
20 CDS

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whole genome shotgun sequence
NZ_ACEH01000042
59.9 KB
65 CDS

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whole genome shotgun sequence
NZ_ACEH01000043
18.0 KB
11 CDS

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whole genome shotgun sequence
NZ_ACEH01000044
40.3 KB
43 CDS

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whole genome shotgun sequence
NZ_ACEH01000045
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACEH01000046
91.7 KB
85 CDS

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whole genome shotgun sequence
NZ_ACEH01000047
98.8 KB
101 CDS

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whole genome shotgun sequence
NZ_ACEH01000048
30.7 KB
28 CDS

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whole genome shotgun sequence
NZ_ACEH01000049
49.7 KB
50 CDS

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whole genome shotgun sequence
NZ_ACEH01000050
29.3 KB
29 CDS

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whole genome shotgun sequence
NZ_ACEH01000051
66.4 KB
53 CDS

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whole genome shotgun sequence
NZ_ACEH01000052
7.8 KB
9 CDS

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whole genome shotgun sequence
NZ_ACEH01000053
12.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACEH01000054
42.3 KB
37 CDS

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whole genome shotgun sequence
NZ_ACEH01000055
42.2 KB
39 CDS

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whole genome shotgun sequence
NZ_ACEH01000056
47.6 KB
59 CDS

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whole genome shotgun sequence
NZ_ACEH01000057
16.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ACEH01000058
205.2 KB
196 CDS

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whole genome shotgun sequence
NZ_ACEH01000059
37.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ACEH01000060
48.5 KB
51 CDS

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whole genome shotgun sequence
NZ_ACEH01000061
63.7 KB
61 CDS

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whole genome shotgun sequence
NZ_ACEH01000062
65.7 KB
67 CDS

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whole genome shotgun sequence
NZ_ACEH01000063
103.8 KB
101 CDS

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whole genome shotgun sequence
NZ_ACEH01000064
14.7 KB
17 CDS

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whole genome shotgun sequence
NZ_ACEH01000065
3.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEH01000066
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACEH01000067
813 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACEH01000068
6.1 KB
0 CDS

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Taxonomy

External Links

Brucella neotomae 5K33

Search Genome

Sequences

PubMed Search for Brucella neotomae 5K33

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