Brucella suis bv. 3 str. 686

Broad Institute

GC Content: 57.3%, Released Date: Jan. 23, 2009 #17865

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACBL01000001
947 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000002
560 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000003
627 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000004
949 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACBL01000005
18.9 KB
25 CDS

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whole genome shotgun sequence
NZ_ACBL01000006
62.4 KB
47 CDS

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whole genome shotgun sequence
NZ_ACBL01000007
54.5 KB
51 CDS

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whole genome shotgun sequence
NZ_ACBL01000008
3.3 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000009
37.3 KB
31 CDS

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whole genome shotgun sequence
NZ_ACBL01000010
11.7 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBL01000011
17.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ACBL01000012
6.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000013
13.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBL01000014
18.7 KB
25 CDS

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whole genome shotgun sequence
NZ_ACBL01000015
12.7 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBL01000016
39.4 KB
33 CDS

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whole genome shotgun sequence
NZ_ACBL01000017
7.6 KB
8 CDS

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whole genome shotgun sequence
NZ_ACBL01000018
42.9 KB
43 CDS

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whole genome shotgun sequence
NZ_ACBL01000019
10.5 KB
12 CDS

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whole genome shotgun sequence
NZ_ACBL01000020
31.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ACBL01000021
52.2 KB
50 CDS

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whole genome shotgun sequence
NZ_ACBL01000022
1.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ACBL01000023
47.0 KB
40 CDS

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whole genome shotgun sequence
NZ_ACBL01000024
56.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ACBL01000025
11.5 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBL01000026
40.1 KB
34 CDS

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whole genome shotgun sequence
NZ_ACBL01000027
13.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBL01000028
2.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000029
3.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBL01000030
43.6 KB
39 CDS

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whole genome shotgun sequence
NZ_ACBL01000031
55.6 KB
53 CDS

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whole genome shotgun sequence
NZ_ACBL01000032
71.3 KB
60 CDS

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whole genome shotgun sequence
NZ_ACBL01000033
46.5 KB
44 CDS

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whole genome shotgun sequence
NZ_ACBL01000034
53.2 KB
46 CDS

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whole genome shotgun sequence
NZ_ACBL01000035
1.7 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000036
1.9 KB
2 CDS

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whole genome shotgun sequence
NZ_ACBL01000037
10.9 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBL01000038
92.2 KB
82 CDS

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whole genome shotgun sequence
NZ_ACBL01000039
5.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ACBL01000040
19.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ACBL01000041
21.5 KB
23 CDS

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whole genome shotgun sequence
NZ_ACBL01000042
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000043
21.8 KB
21 CDS

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whole genome shotgun sequence
NZ_ACBL01000044
6.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACBL01000045
20.4 KB
21 CDS

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whole genome shotgun sequence
NZ_ACBL01000046
10.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ACBL01000047
11.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBL01000048
33.9 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBL01000049
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACBL01000050
4.9 KB
0 CDS

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whole genome shotgun sequence
NZ_ACBL01000051
65.6 KB
68 CDS

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whole genome shotgun sequence
NZ_ACBL01000052
27.6 KB
34 CDS

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whole genome shotgun sequence
NZ_ACBL01000053
11.4 KB
13 CDS

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whole genome shotgun sequence
NZ_ACBL01000054
28.7 KB
25 CDS

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whole genome shotgun sequence
NZ_ACBL01000055
42.2 KB
39 CDS

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whole genome shotgun sequence
NZ_ACBL01000056
8.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ACBL01000057
3.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000058
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000059
953 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACBL01000060
816 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000061
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ACBL01000062
863 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000063
1001 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACBL01000064
1010 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000065
897 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000066
811 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACBL01000067
4.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBL01000068
32.5 KB
28 CDS

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whole genome shotgun sequence
NZ_ACBL01000069
40.1 KB
39 CDS

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whole genome shotgun sequence
NZ_ACBL01000070
55.4 KB
52 CDS

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whole genome shotgun sequence
NZ_ACBL01000071
111.1 KB
113 CDS

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whole genome shotgun sequence
NZ_ACBL01000072
4.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBL01000073
3.3 KB
8 CDS

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whole genome shotgun sequence
NZ_ACBL01000074
73.4 KB
75 CDS

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whole genome shotgun sequence
NZ_ACBL01000075
15.1 KB
8 CDS

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whole genome shotgun sequence
NZ_ACBL01000076
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000077
8.2 KB
11 CDS

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whole genome shotgun sequence
NZ_ACBL01000078
7.0 KB
8 CDS

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whole genome shotgun sequence
NZ_ACBL01000079
43.1 KB
45 CDS

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whole genome shotgun sequence
NZ_ACBL01000080
153.1 KB
149 CDS

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whole genome shotgun sequence
NZ_ACBL01000081
49.1 KB
47 CDS

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whole genome shotgun sequence
NZ_ACBL01000082
1.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBL01000083
47.6 KB
48 CDS

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whole genome shotgun sequence
NZ_ACBL01000084
75.3 KB
65 CDS

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whole genome shotgun sequence
NZ_ACBL01000085
5.1 KB
8 CDS

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whole genome shotgun sequence
NZ_ACBL01000086
22.4 KB
22 CDS

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whole genome shotgun sequence
NZ_ACBL01000087
740 bytes
2 CDS

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whole genome shotgun sequence
NZ_ACBL01000088
612 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000089
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000090
10.9 KB
8 CDS

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whole genome shotgun sequence
NZ_ACBL01000091
19.3 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBL01000092
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBL01000093
58.0 KB
54 CDS

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whole genome shotgun sequence
NZ_ACBL01000094
6.2 KB
7 CDS

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whole genome shotgun sequence
NZ_ACBL01000095
45.1 KB
57 CDS

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whole genome shotgun sequence
NZ_ACBL01000096
16.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ACBL01000097
11.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBL01000098
4.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000099
74.6 KB
67 CDS

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whole genome shotgun sequence
NZ_ACBL01000100
71.7 KB
70 CDS

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whole genome shotgun sequence
NZ_ACBL01000101
46.1 KB
46 CDS

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whole genome shotgun sequence
NZ_ACBL01000102
35.5 KB
35 CDS

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whole genome shotgun sequence
NZ_ACBL01000103
6.0 KB
10 CDS

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whole genome shotgun sequence
NZ_ACBL01000104
2.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000105
68.7 KB
68 CDS

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whole genome shotgun sequence
NZ_ACBL01000106
10.1 KB
7 CDS

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whole genome shotgun sequence
NZ_ACBL01000107
25.2 KB
25 CDS

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whole genome shotgun sequence
NZ_ACBL01000108
7.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACBL01000109
26.3 KB
26 CDS

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whole genome shotgun sequence
NZ_ACBL01000110
19.7 KB
21 CDS

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whole genome shotgun sequence
NZ_ACBL01000111
73.8 KB
77 CDS

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whole genome shotgun sequence
NZ_ACBL01000112
16.1 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBL01000113
47.1 KB
42 CDS

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whole genome shotgun sequence
NZ_ACBL01000114
12.6 KB
17 CDS

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whole genome shotgun sequence
NZ_ACBL01000115
31.7 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBL01000116
50.3 KB
52 CDS

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whole genome shotgun sequence
NZ_ACBL01000117
15.0 KB
15 CDS

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whole genome shotgun sequence
NZ_ACBL01000118
67.0 KB
59 CDS

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whole genome shotgun sequence
NZ_ACBL01000119
31.4 KB
31 CDS

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whole genome shotgun sequence
NZ_ACBL01000120
1.9 KB
1 CDS

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whole genome shotgun sequence
NZ_ACBL01000121
25.1 KB
23 CDS

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whole genome shotgun sequence
NZ_ACBL01000122
6.1 KB
6 CDS

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whole genome shotgun sequence
NZ_ACBL01000123
2.1 KB
3 CDS

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whole genome shotgun sequence
NZ_ACBL01000124
16.7 KB
12 CDS

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whole genome shotgun sequence
NZ_ACBL01000125
8.6 KB
9 CDS

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whole genome shotgun sequence
NZ_ACBL01000126
46.1 KB
48 CDS

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whole genome shotgun sequence
NZ_ACBL01000127
29.1 KB
29 CDS

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whole genome shotgun sequence
NZ_ACBL01000128
30.4 KB
32 CDS

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whole genome shotgun sequence
NZ_ACBL01000129
500 bytes
2 CDS

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Taxonomy

External Links

Brucella suis bv. 3 str. 686

Search Genome

Sequences

PubMed Search for Brucella suis bv. 3 str. 686

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