Burkholderia pseudomallei Pakistan 9

Los Alamos National Laboratory

GC Content: 68.1%, Released Date: March 31, 2009 #17891

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACKA01000001
72.9 KB
78 CDS

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whole genome shotgun sequence
NZ_ACKA01000002
81.6 KB
80 CDS

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whole genome shotgun sequence
NZ_ACKA01000003
31.3 KB
38 CDS

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whole genome shotgun sequence
NZ_ACKA01000004
297.6 KB
330 CDS

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whole genome shotgun sequence
NZ_ACKA01000005
36.8 KB
26 CDS

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whole genome shotgun sequence
NZ_ACKA01000006
9.1 KB
8 CDS

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whole genome shotgun sequence
NZ_ACKA01000007
52.5 KB
56 CDS

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whole genome shotgun sequence
NZ_ACKA01000008
24.7 KB
24 CDS

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whole genome shotgun sequence
NZ_ACKA01000009
128.2 KB
150 CDS

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whole genome shotgun sequence
NZ_ACKA01000010
22.5 KB
27 CDS

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whole genome shotgun sequence
NZ_ACKA01000011
87.4 KB
96 CDS

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whole genome shotgun sequence
NZ_ACKA01000012
157.2 KB
175 CDS

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whole genome shotgun sequence
NZ_ACKA01000013
165.2 KB
183 CDS

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whole genome shotgun sequence
NZ_ACKA01000014
54.9 KB
67 CDS

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whole genome shotgun sequence
NZ_ACKA01000015
159.0 KB
159 CDS

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whole genome shotgun sequence
NZ_ACKA01000016
200.9 KB
219 CDS

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whole genome shotgun sequence
NZ_ACKA01000017
33.6 KB
36 CDS

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whole genome shotgun sequence
NZ_ACKA01000018
10.6 KB
14 CDS

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whole genome shotgun sequence
NZ_ACKA01000019
53.1 KB
59 CDS

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whole genome shotgun sequence
NZ_ACKA01000020
72.9 KB
74 CDS

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whole genome shotgun sequence
NZ_ACKA01000021
13.8 KB
11 CDS

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whole genome shotgun sequence
NZ_ACKA01000022
116.5 KB
122 CDS

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whole genome shotgun sequence
NZ_ACKA01000023
349.2 KB
415 CDS

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whole genome shotgun sequence
NZ_ACKA01000024
57.7 KB
15 CDS

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whole genome shotgun sequence
NZ_ACKA01000025
138.2 KB
154 CDS

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whole genome shotgun sequence
NZ_ACKA01000026
89.7 KB
86 CDS

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whole genome shotgun sequence
NZ_ACKA01000027
330.8 KB
387 CDS

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whole genome shotgun sequence
NZ_ACKA01000028
188.9 KB
203 CDS

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whole genome shotgun sequence
NZ_ACKA01000029
98.6 KB
102 CDS

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whole genome shotgun sequence
NZ_ACKA01000030
19.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ACKA01000031
22.8 KB
30 CDS

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whole genome shotgun sequence
NZ_ACKA01000032
137.5 KB
149 CDS

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whole genome shotgun sequence
NZ_ACKA01000033
193.0 KB
190 CDS

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whole genome shotgun sequence
NZ_ACKA01000034
159.7 KB
153 CDS

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whole genome shotgun sequence
NZ_ACKA01000035
98.7 KB
116 CDS

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whole genome shotgun sequence
NZ_ACKA01000036
129.4 KB
159 CDS

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whole genome shotgun sequence
NZ_ACKA01000037
449.1 KB
443 CDS

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whole genome shotgun sequence
NZ_ACKA01000038
28.4 KB
28 CDS

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whole genome shotgun sequence
NZ_ACKA01000039
222.5 KB
267 CDS

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whole genome shotgun sequence
NZ_ACKA01000040
137.4 KB
152 CDS

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whole genome shotgun sequence
NZ_ACKA01000041
2.8 KB
0 CDS

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whole genome shotgun sequence
NZ_ACKA01000042
146.4 KB
156 CDS

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whole genome shotgun sequence
NZ_ACKA01000043
183.0 KB
198 CDS

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whole genome shotgun sequence
NZ_ACKA01000044
27.7 KB
36 CDS

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whole genome shotgun sequence
NZ_ACKA01000045
58.5 KB
63 CDS

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whole genome shotgun sequence
NZ_ACKA01000046
48.0 KB
61 CDS

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whole genome shotgun sequence
NZ_ACKA01000047
58.6 KB
71 CDS

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whole genome shotgun sequence
NZ_ACKA01000048
93.8 KB
107 CDS

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whole genome shotgun sequence
NZ_ACKA01000049
21.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ACKA01000050
144.4 KB
146 CDS

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whole genome shotgun sequence
NZ_ACKA01000051
185.8 KB
192 CDS

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whole genome shotgun sequence
NZ_ACKA01000052
113.3 KB
131 CDS

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whole genome shotgun sequence
NZ_ACKA01000053
38.4 KB
43 CDS

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whole genome shotgun sequence
NZ_ACKA01000054
146.7 KB
147 CDS

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whole genome shotgun sequence
NZ_ACKA01000055
37.7 KB
43 CDS

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whole genome shotgun sequence
NZ_ACKA01000056
89.0 KB
94 CDS

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whole genome shotgun sequence
NZ_ACKA01000057
104.0 KB
99 CDS

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whole genome shotgun sequence
NZ_ACKA01000058
40.2 KB
34 CDS

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whole genome shotgun sequence
NZ_ACKA01000059
17.4 KB
20 CDS

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whole genome shotgun sequence
NZ_ACKA01000060
4.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKA01000061
79.4 KB
76 CDS

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whole genome shotgun sequence
NZ_ACKA01000062
10.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ACKA01000063
135.2 KB
155 CDS

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whole genome shotgun sequence
NZ_ACKA01000064
120.9 KB
138 CDS

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whole genome shotgun sequence
NZ_ACKA01000065
81.3 KB
64 CDS

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whole genome shotgun sequence
NZ_ACKA01000066
11.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ACKA01000067
2.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ACKA01000068
70.3 KB
86 CDS

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whole genome shotgun sequence
NZ_ACKA01000069
86.8 KB
88 CDS

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whole genome shotgun sequence
NZ_ACKA01000070
84.6 KB
96 CDS

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whole genome shotgun sequence
NZ_ACKA01000071
3.6 KB
9 CDS

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Taxonomy

External Links

Burkholderia pseudomallei Pakistan 9

Search Genome

Sequences

PubMed Search for Burkholderia pseudomallei Pakistan 9

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