Campylobacter gracilis RM3268

J. Craig Venter Institute

Genome Size: 1.8 megabases, Released Date: Sept. 8, 2009 #17902

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACYG01000001
9.7 KB
16 CDS

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whole genome shotgun sequence
NZ_ACYG01000002
683 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACYG01000003
3.0 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYG01000004
26.7 KB
48 CDS

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whole genome shotgun sequence
NZ_ACYG01000005
115.3 KB
151 CDS

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whole genome shotgun sequence
NZ_ACYG01000006
1.6 KB
3 CDS

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whole genome shotgun sequence
NZ_ACYG01000007
24.8 KB
30 CDS

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whole genome shotgun sequence
NZ_ACYG01000008
44.8 KB
61 CDS

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whole genome shotgun sequence
NZ_ACYG01000009
202.9 KB
256 CDS

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whole genome shotgun sequence
NZ_ACYG01000010
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYG01000011
13.9 KB
22 CDS

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whole genome shotgun sequence
NZ_ACYG01000012
796 bytes
3 CDS

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whole genome shotgun sequence
NZ_ACYG01000013
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACYG01000014
27.4 KB
50 CDS

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whole genome shotgun sequence
NZ_ACYG01000015
25.2 KB
32 CDS

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whole genome shotgun sequence
NZ_ACYG01000016
3.8 KB
2 CDS

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whole genome shotgun sequence
NZ_ACYG01000017
23.3 KB
36 CDS

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whole genome shotgun sequence
NZ_ACYG01000018
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ACYG01000019
288.6 KB
386 CDS

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whole genome shotgun sequence
NZ_ACYG01000020
788 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACYG01000021
15.3 KB
17 CDS

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whole genome shotgun sequence
NZ_ACYG01000022
116.4 KB
145 CDS

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whole genome shotgun sequence
NZ_ACYG01000023
2.4 KB
4 CDS

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whole genome shotgun sequence
NZ_ACYG01000024
199.0 KB
254 CDS

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whole genome shotgun sequence
NZ_ACYG01000025
94.4 KB
120 CDS

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whole genome shotgun sequence
NZ_ACYG01000026
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ACYG01000027
478.7 KB
610 CDS

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whole genome shotgun sequence
NZ_ACYG01000028
39.6 KB
56 CDS

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whole genome shotgun sequence
NZ_ACYG01000029
613 bytes
0 CDS

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whole genome shotgun sequence
NZ_ACYG01000030
193.2 KB
229 CDS

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whole genome shotgun sequence
NZ_ACYG01000031
92.1 KB
115 CDS

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whole genome shotgun sequence
NZ_ACYG01000032
150.8 KB
188 CDS

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whole genome shotgun sequence
NZ_ACYG01000033
1.4 KB
1 CDS

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Taxonomy

External Links

Campylobacter gracilis RM3268

Search Genome

Sequences

PubMed Search for Campylobacter gracilis RM3268

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