Campylobacter jejuni subsp. jejuni 1336

Veterinary Pathology, University of Liverpool, UNITED KINGDOM

Genome Size: 3.4 megabases, GC Content: 29.7%, Released Date: Jan. 15, 2010 #20203

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

contig00002, whole genome shotgun sequence
NZ_ADGL01000001
89.2 KB
93 CDS

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contig00003, whole genome shotgun sequence
NZ_ADGL01000002
21.6 KB
23 CDS

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contig00004, whole genome shotgun sequence
NZ_ADGL01000003
77.6 KB
93 CDS

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contig00005, whole genome shotgun sequence
NZ_ADGL01000004
6.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ADGL01000005
150.3 KB
167 CDS

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whole genome shotgun sequence
NZ_ADGL01000006
124.0 KB
127 CDS

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whole genome shotgun sequence
NZ_ADGL01000007
52.2 KB
56 CDS

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whole genome shotgun sequence
NZ_ADGL01000008
451 bytes
2 CDS

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whole genome shotgun sequence
NZ_ADGL01000009
85.8 KB
92 CDS

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whole genome shotgun sequence
NZ_ADGL01000010
3.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ADGL01000011
69.6 KB
70 CDS

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whole genome shotgun sequence
NZ_ADGL01000012
6.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ADGL01000013
779 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADGL01000014
1.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ADGL01000015
8.9 KB
9 CDS

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whole genome shotgun sequence
NZ_ADGL01000016
298.3 KB
323 CDS

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whole genome shotgun sequence
NZ_ADGL01000017
144.3 KB
147 CDS

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whole genome shotgun sequence
NZ_ADGL01000018
21.7 KB
23 CDS

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whole genome shotgun sequence
NZ_ADGL01000019
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ADGL01000020
78.7 KB
75 CDS

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whole genome shotgun sequence
NZ_ADGL01000021
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ADGL01000022
36.5 KB
35 CDS

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whole genome shotgun sequence
NZ_ADGL01000023
92.2 KB
101 CDS

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whole genome shotgun sequence
NZ_ADGL01000024
102.1 KB
125 CDS

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whole genome shotgun sequence
NZ_ADGL01000025
516 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADGL01000026
6.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ADGL01000027
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ADGL01000028
6.7 KB
7 CDS

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whole genome shotgun sequence
NZ_ADGL01000029
5.0 KB
12 CDS

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whole genome shotgun sequence
NZ_ADGL01000030
15.6 KB
30 CDS

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whole genome shotgun sequence
NZ_ADGL01000031
659 bytes
0 CDS

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whole genome shotgun sequence
NZ_ADGL01000032
64.0 KB
66 CDS

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whole genome shotgun sequence
NZ_ADGL01000033
5.0 KB
7 CDS

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whole genome shotgun sequence
NZ_ADGL01000034
19.8 KB
20 CDS

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whole genome shotgun sequence
NZ_ADGL01000035
37.2 KB
38 CDS

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Taxonomy

External Links

Campylobacter jejuni subsp. jejuni 1336

Search Genome

Sequences

PubMed Search for Campylobacter jejuni subsp. jejuni 1336

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