Campylobacter jejuni subsp. jejuni CF93-6

TIGR

GC Content: 30.5%, Released Date: Jan. 27, 2006 #17907

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AANJ01000001
283.9 KB
315 CDS

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whole genome shotgun sequence
NZ_AANJ01000002
235.4 KB
259 CDS

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whole genome shotgun sequence
NZ_AANJ01000003
221.4 KB
253 CDS

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whole genome shotgun sequence
NZ_AANJ01000004
177.3 KB
195 CDS

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whole genome shotgun sequence
NZ_AANJ01000005
169.0 KB
175 CDS

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whole genome shotgun sequence
NZ_AANJ01000006
143.2 KB
153 CDS

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whole genome shotgun sequence
NZ_AANJ01000007
132.3 KB
136 CDS

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whole genome shotgun sequence
NZ_AANJ01000008
89.2 KB
92 CDS

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whole genome shotgun sequence
NZ_AANJ01000009
58.9 KB
49 CDS

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whole genome shotgun sequence
NZ_AANJ01000010
50.9 KB
50 CDS

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whole genome shotgun sequence
NZ_AANJ01000011
40.6 KB
38 CDS

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whole genome shotgun sequence
NZ_AANJ01000012
32.9 KB
40 CDS

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whole genome shotgun sequence
NZ_AANJ01000013
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_AANJ01000014
945 bytes
0 CDS

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Taxonomy

External Links

Campylobacter jejuni subsp. jejuni CF93-6

Search Genome

Sequences

PubMed Search for Campylobacter jejuni subsp. jejuni CF93-6

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