Campylobacter jejuni subsp. jejuni CG8486

NMRC

GC Content: 30.4%, Released Date: April 25, 2007 #17909

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AASY01000001
228.7 KB
209 CDS

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whole genome shotgun sequence
NZ_AASY01000002
183.6 KB
169 CDS

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whole genome shotgun sequence
NZ_AASY01000003
172.6 KB
154 CDS

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whole genome shotgun sequence
NZ_AASY01000004
168.7 KB
152 CDS

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whole genome shotgun sequence
NZ_AASY01000005
117.6 KB
115 CDS

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whole genome shotgun sequence
NZ_AASY01000006
107.5 KB
112 CDS

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whole genome shotgun sequence
NZ_AASY01000007
102.7 KB
94 CDS

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whole genome shotgun sequence
NZ_AASY01000008
102.7 KB
79 CDS

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whole genome shotgun sequence
NZ_AASY01000009
81.1 KB
74 CDS

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whole genome shotgun sequence
NZ_AASY01000010
77.4 KB
74 CDS

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whole genome shotgun sequence
NZ_AASY01000011
77.1 KB
72 CDS

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whole genome shotgun sequence
NZ_AASY01000012
68.9 KB
56 CDS

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whole genome shotgun sequence
NZ_AASY01000013
39.7 KB
38 CDS

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whole genome shotgun sequence
NZ_AASY01000014
20.2 KB
19 CDS

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whole genome shotgun sequence
NZ_AASY01000015
3.1 KB
1 CDS

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whole genome shotgun sequence
NZ_AASY01000016
2.8 KB
3 CDS

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whole genome shotgun sequence
NZ_AASY01000017
2.3 KB
2 CDS

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whole genome shotgun sequence
NZ_AASY01000018
2.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AASY01000019
1.4 KB
2 CDS

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References

Genome sequence of a clinical isolate of Campylobacter jejuni from Thailand
Poly,F., Read,T., Tribble,D.R., Baqar,S., Lorenzo,M. and Guerry,P. Infect. Immun. 75 (7), 3425-3433 (2007)
PubMed, PubGet, HubMed
Genome sequence of a clinical isolate of Campylobacter jejuni from Thailand
Poly,F., Read,T., Tribble,D.R., Baqar,S., Lorenzo,M. and Guerry,P. Infect. Immun. 75 (7), 3425-3433 (2007)
PubMed, PubGet, HubMed

Taxonomy

External Links

Campylobacter jejuni subsp. jejuni CG8486

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Sequences

References

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