Campylobacter jejuni subsp. jejuni HB93-13

TIGR

GC Content: 30.6%, Released Date: Jan. 27, 2006 #17910

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_AANQ01000001
737.4 KB
761 CDS

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whole genome shotgun sequence
NZ_AANQ01000002
379.9 KB
396 CDS

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whole genome shotgun sequence
NZ_AANQ01000003
329.2 KB
367 CDS

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whole genome shotgun sequence
NZ_AANQ01000004
72.5 KB
54 CDS

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whole genome shotgun sequence
NZ_AANQ01000005
55.8 KB
68 CDS

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whole genome shotgun sequence
NZ_AANQ01000006
38.0 KB
42 CDS

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whole genome shotgun sequence
NZ_AANQ01000007
15.8 KB
18 CDS

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whole genome shotgun sequence
NZ_AANQ01000008
6.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000009
3.3 KB
4 CDS

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whole genome shotgun sequence
NZ_AANQ01000010
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000011
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000012
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000013
982 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000014
980 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000015
916 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000016
837 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000017
810 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000018
766 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000019
719 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000020
718 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000021
683 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000022
625 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000023
614 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000024
612 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000025
584 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000026
557 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000027
544 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000028
514 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000029
509 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000030
392 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000031
385 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000032
330 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000033
273 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000034
259 bytes
0 CDS

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whole genome shotgun sequence
NZ_AANQ01000035
231 bytes
0 CDS

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Taxonomy

External Links

Campylobacter jejuni subsp. jejuni HB93-13

Search Genome

Sequences

PubMed Search for Campylobacter jejuni subsp. jejuni HB93-13

Related Genomes