Candidatus Sulcia muelleri GWSS

University of Arizona

Genome Size: 0.25 megabases, GC Content: 22.4%, Released Date: July 19, 2007 #16831

Completed genome

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

complete genome
NC_010118
239.8 KB
227 CDS

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References

Parallel genomic evolution and metabolic interdependence in an ancient symbiosis
McCutcheon,J.P. and Moran,N.A. Proc. Natl. Acad. Sci. U.S.A. 104 (49), 19392-19397 (2007)
PubMed, PubGet, HubMed

Taxonomy

External Links

Candidatus Sulcia muelleri GWSS

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Sequences

References

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