Capnocytophaga gingivalis ATCC 33624

J. Craig Venter Institute

Genome Size: 4.0 megabases, GC Content: 40.5%, Released Date: April 29, 2009 #17916

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACLQ01000001
67.3 KB
73 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000002
72.1 KB
77 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000003
185.8 KB
179 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000004
328 bytes
2 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000005
25.0 KB
30 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000006
37.3 KB
44 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000007
32.4 KB
36 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000008
106.3 KB
115 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000009
11.9 KB
12 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000010
229.5 KB
257 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000011
63.7 KB
66 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000012
24.7 KB
21 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000013
17.7 KB
8 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000014
41.7 KB
44 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000015
7.3 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000016
190.9 KB
209 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000017
7.6 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000018
126.9 KB
129 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000019
330.1 KB
328 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000020
5.3 KB
6 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000021
83.2 KB
75 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000022
149.2 KB
166 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000023
123.3 KB
123 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000024
114.7 KB
104 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000025
1.9 KB
4 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000026
42.5 KB
39 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000027
254 bytes
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000028
27.8 KB
24 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000029
23.8 KB
9 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000030
7.2 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000031
93.0 KB
65 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000032
1.1 KB
0 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000033
3.1 KB
3 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000034
94.5 KB
95 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000035
246.9 KB
224 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000036
6.2 KB
5 CDS

Table view
Circular View
Artemis Viewer

whole genome shotgun sequence
NZ_ACLQ01000037
2.5 KB
1 CDS

Table view
Circular View
Artemis Viewer

Taxonomy

External Links

Capnocytophaga gingivalis ATCC 33624

Search Genome

Sequences

PubMed Search for Capnocytophaga gingivalis ATCC 33624

Related Genomes