Carnobacterium sp. AT7

J. Craig Venter Institute

GC Content: 35.3%, Released Date: Nov. 9, 2007 #17919

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABHH01000001
167.3 KB
158 CDS

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whole genome shotgun sequence
NZ_ABHH01000002
163.6 KB
162 CDS

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whole genome shotgun sequence
NZ_ABHH01000003
145.8 KB
146 CDS

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whole genome shotgun sequence
NZ_ABHH01000004
138.3 KB
134 CDS

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whole genome shotgun sequence
NZ_ABHH01000005
107.7 KB
104 CDS

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whole genome shotgun sequence
NZ_ABHH01000006
93.3 KB
103 CDS

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whole genome shotgun sequence
NZ_ABHH01000007
92.3 KB
111 CDS

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whole genome shotgun sequence
NZ_ABHH01000008
84.6 KB
91 CDS

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whole genome shotgun sequence
NZ_ABHH01000009
78.3 KB
74 CDS

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whole genome shotgun sequence
NZ_ABHH01000010
77.6 KB
75 CDS

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whole genome shotgun sequence
NZ_ABHH01000011
75.0 KB
73 CDS

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whole genome shotgun sequence
NZ_ABHH01000012
74.3 KB
80 CDS

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whole genome shotgun sequence
NZ_ABHH01000013
71.9 KB
65 CDS

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whole genome shotgun sequence
NZ_ABHH01000014
60.9 KB
54 CDS

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whole genome shotgun sequence
NZ_ABHH01000015
59.9 KB
56 CDS

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whole genome shotgun sequence
NZ_ABHH01000016
56.7 KB
57 CDS

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whole genome shotgun sequence
NZ_ABHH01000017
52.3 KB
52 CDS

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whole genome shotgun sequence
NZ_ABHH01000018
46.9 KB
49 CDS

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whole genome shotgun sequence
NZ_ABHH01000019
44.7 KB
43 CDS

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whole genome shotgun sequence
NZ_ABHH01000020
40.4 KB
44 CDS

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whole genome shotgun sequence
NZ_ABHH01000021
39.8 KB
38 CDS

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whole genome shotgun sequence
NZ_ABHH01000022
31.8 KB
37 CDS

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whole genome shotgun sequence
NZ_ABHH01000023
29.6 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHH01000024
29.4 KB
34 CDS

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whole genome shotgun sequence
NZ_ABHH01000025
29.2 KB
30 CDS

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whole genome shotgun sequence
NZ_ABHH01000026
29.1 KB
31 CDS

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whole genome shotgun sequence
NZ_ABHH01000027
27.6 KB
29 CDS

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whole genome shotgun sequence
NZ_ABHH01000028
27.5 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHH01000029
26.7 KB
26 CDS

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whole genome shotgun sequence
NZ_ABHH01000030
26.1 KB
25 CDS

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whole genome shotgun sequence
NZ_ABHH01000031
26.0 KB
26 CDS

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whole genome shotgun sequence
NZ_ABHH01000032
25.6 KB
23 CDS

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whole genome shotgun sequence
NZ_ABHH01000033
21.9 KB
23 CDS

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whole genome shotgun sequence
NZ_ABHH01000034
21.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ABHH01000035
21.2 KB
24 CDS

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whole genome shotgun sequence
NZ_ABHH01000036
17.0 KB
18 CDS

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whole genome shotgun sequence
NZ_ABHH01000037
16.7 KB
11 CDS

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whole genome shotgun sequence
NZ_ABHH01000038
14.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHH01000039
14.1 KB
13 CDS

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whole genome shotgun sequence
NZ_ABHH01000040
12.9 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHH01000041
12.8 KB
15 CDS

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whole genome shotgun sequence
NZ_ABHH01000042
11.9 KB
7 CDS

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whole genome shotgun sequence
NZ_ABHH01000043
11.8 KB
7 CDS

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whole genome shotgun sequence
NZ_ABHH01000044
11.4 KB
18 CDS

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whole genome shotgun sequence
NZ_ABHH01000045
11.3 KB
23 CDS

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whole genome shotgun sequence
NZ_ABHH01000046
10.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHH01000047
10.3 KB
11 CDS

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whole genome shotgun sequence
NZ_ABHH01000048
8.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHH01000049
8.7 KB
14 CDS

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whole genome shotgun sequence
NZ_ABHH01000050
8.2 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHH01000051
8.1 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHH01000052
7.6 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHH01000053
6.4 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHH01000054
6.2 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHH01000055
5.9 KB
6 CDS

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whole genome shotgun sequence
NZ_ABHH01000056
4.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHH01000057
2.5 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHH01000058
2.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHH01000059
1.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHH01000060
1.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABHH01000061
1.7 KB
5 CDS

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whole genome shotgun sequence
NZ_ABHH01000062
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHH01000063
1.4 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHH01000064
1.4 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHH01000065
1.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABHH01000066
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHH01000067
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABHH01000068
1.2 KB
2 CDS

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whole genome shotgun sequence
NZ_ABHH01000069
1.0 KB
2 CDS

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Taxonomy

External Links

Carnobacterium sp. AT7

Search Genome

Sequences

PubMed Search for Carnobacterium sp. AT7

Related Genomes