Catonella morbi ATCC 51271

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 47.0%, Released Date: March 17, 2009 #17921

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ACIL02000001
331.2 KB
312 CDS

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whole genome shotgun sequence
NZ_ACIL02000002
66.8 KB
61 CDS

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whole genome shotgun sequence
NZ_ACIL02000003
237.2 KB
212 CDS

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whole genome shotgun sequence
NZ_ACIL02000004
173.0 KB
179 CDS

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whole genome shotgun sequence
NZ_ACIL02000005
145.3 KB
152 CDS

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whole genome shotgun sequence
NZ_ACIL02000006
48.3 KB
55 CDS

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whole genome shotgun sequence
NZ_ACIL02000007
126.3 KB
143 CDS

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whole genome shotgun sequence
NZ_ACIL02000008
2.4 KB
5 CDS

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whole genome shotgun sequence
NZ_ACIL02000009
2.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ACIL02000010
329 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACIL02000011
33.5 KB
41 CDS

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whole genome shotgun sequence
NZ_ACIL02000012
68.2 KB
63 CDS

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whole genome shotgun sequence
NZ_ACIL02000013
314.5 KB
316 CDS

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whole genome shotgun sequence
NZ_ACIL02000014
72.4 KB
65 CDS

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whole genome shotgun sequence
NZ_ACIL02000015
102.5 KB
108 CDS

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whole genome shotgun sequence
NZ_ACIL02000016
103.1 KB
91 CDS

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whole genome shotgun sequence
NZ_ACIL02000017
164.9 KB
139 CDS

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whole genome shotgun sequence
NZ_ACIL02000018
995 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACIL02000019
340 bytes
1 CDS

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whole genome shotgun sequence
NZ_ACIL02000020
629 bytes
2 CDS

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Taxonomy

External Links

Catonella morbi ATCC 51271

Search Genome

Sequences

PubMed Search for Catonella morbi ATCC 51271

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