Clostridium bartlettii DSM 16795

Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine

GC Content: 28.8%, Released Date: Sept. 11, 2007 #17936

incomplete

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Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABEZ02000001
67.3 KB
75 CDS

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whole genome shotgun sequence
NZ_ABEZ02000002
803 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEZ02000003
2.0 KB
2 CDS

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whole genome shotgun sequence
NZ_ABEZ02000004
54.7 KB
63 CDS

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whole genome shotgun sequence
NZ_ABEZ02000005
3.2 KB
1 CDS

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whole genome shotgun sequence
NZ_ABEZ02000006
85.7 KB
75 CDS

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whole genome shotgun sequence
NZ_ABEZ02000007
302.3 KB
264 CDS

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whole genome shotgun sequence
NZ_ABEZ02000008
919 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABEZ02000009
6.8 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEZ02000010
2.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABEZ02000011
11.2 KB
13 CDS

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whole genome shotgun sequence
NZ_ABEZ02000012
5.3 KB
4 CDS

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whole genome shotgun sequence
NZ_ABEZ02000013
209.4 KB
197 CDS

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whole genome shotgun sequence
NZ_ABEZ02000014
3.5 KB
3 CDS

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whole genome shotgun sequence
NZ_ABEZ02000015
2.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABEZ02000016
282.5 KB
258 CDS

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whole genome shotgun sequence
NZ_ABEZ02000017
429.0 KB
392 CDS

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whole genome shotgun sequence
NZ_ABEZ02000018
109.0 KB
107 CDS

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whole genome shotgun sequence
NZ_ABEZ02000019
749.4 KB
755 CDS

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whole genome shotgun sequence
NZ_ABEZ02000020
197.3 KB
182 CDS

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whole genome shotgun sequence
NZ_ABEZ02000021
84.1 KB
90 CDS

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whole genome shotgun sequence
NZ_ABEZ02000022
293.7 KB
301 CDS

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Taxonomy

External Links

Clostridium bartlettii DSM 16795

Search Genome

Sequences

PubMed Search for Clostridium bartlettii DSM 16795

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