Clostridium botulinum C str. Eklund

J. Craig Venter Institute

GC Content: 29.0%, Released Date: July 11, 2007 #17939

incomplete

Search Genome

Annotation search: search for genes and features in this genome

BLAST search: search for nucleotide or protein sequences in this genome

Pattern search: search for specific short patterns in this genome

This tool allows you to search within a genome for short DNA sequence patterns, such as a binding site consensus sequence. You can use any IUPAC code, so Ns, Rs, Ys etc. are allowed. Multipliers are contained in parentheses, so you can say A(14), which means a run of 14 As, or A(5 15) which means between 5 and 15 As. Square brackets indicate classes, so [AT] means either A or T. You can also have negatated classes (indicated by braces), so {AT} means neither A nor T. This tool uses the program fuzznuc, part of the EMBOSS software suite- see here for further documentation.

Restrict to region: bp. upstream of a gene
Leave blank for no restriction.

Report matches:

Allow mismatched bases

Sequences

whole genome shotgun sequence
NZ_ABDQ01000001
488.0 KB
406 CDS

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whole genome shotgun sequence
NZ_ABDQ01000002
329.1 KB
312 CDS

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whole genome shotgun sequence
NZ_ABDQ01000003
226.2 KB
225 CDS

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whole genome shotgun sequence
NZ_ABDQ01000004
185.1 KB
144 CDS

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whole genome shotgun sequence
NZ_ABDQ01000005
143.4 KB
118 CDS

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whole genome shotgun sequence
NZ_ABDQ01000006
142.3 KB
116 CDS

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whole genome shotgun sequence
NZ_ABDQ01000007
142.0 KB
153 CDS

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whole genome shotgun sequence
NZ_ABDQ01000008
120.4 KB
87 CDS

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whole genome shotgun sequence
NZ_ABDQ01000009
101.6 KB
116 CDS

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whole genome shotgun sequence
NZ_ABDQ01000010
96.6 KB
77 CDS

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whole genome shotgun sequence
NZ_ABDQ01000011
90.7 KB
78 CDS

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whole genome shotgun sequence
NZ_ABDQ01000012
81.1 KB
66 CDS

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whole genome shotgun sequence
NZ_ABDQ01000013
75.0 KB
71 CDS

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whole genome shotgun sequence
NZ_ABDQ01000014
63.4 KB
64 CDS

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whole genome shotgun sequence
NZ_ABDQ01000015
48.4 KB
49 CDS

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whole genome shotgun sequence
NZ_ABDQ01000016
48.1 KB
44 CDS

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whole genome shotgun sequence
NZ_ABDQ01000017
47.9 KB
38 CDS

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whole genome shotgun sequence
NZ_ABDQ01000018
47.8 KB
48 CDS

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whole genome shotgun sequence
NZ_ABDQ01000019
43.0 KB
58 CDS

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whole genome shotgun sequence
NZ_ABDQ01000020
31.9 KB
30 CDS

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whole genome shotgun sequence
NZ_ABDQ01000021
26.4 KB
26 CDS

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whole genome shotgun sequence
NZ_ABDQ01000022
24.9 KB
18 CDS

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whole genome shotgun sequence
NZ_ABDQ01000023
24.8 KB
16 CDS

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whole genome shotgun sequence
NZ_ABDQ01000024
23.9 KB
19 CDS

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whole genome shotgun sequence
NZ_ABDQ01000025
23.5 KB
26 CDS

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whole genome shotgun sequence
NZ_ABDQ01000026
23.0 KB
21 CDS

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whole genome shotgun sequence
NZ_ABDQ01000027
20.5 KB
16 CDS

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whole genome shotgun sequence
NZ_ABDQ01000028
19.6 KB
20 CDS

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whole genome shotgun sequence
NZ_ABDQ01000029
19.4 KB
17 CDS

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whole genome shotgun sequence
NZ_ABDQ01000030
16.1 KB
10 CDS

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whole genome shotgun sequence
NZ_ABDQ01000031
14.2 KB
17 CDS

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whole genome shotgun sequence
NZ_ABDQ01000032
11.4 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000033
11.4 KB
12 CDS

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whole genome shotgun sequence
NZ_ABDQ01000034
10.7 KB
9 CDS

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whole genome shotgun sequence
NZ_ABDQ01000035
8.6 KB
6 CDS

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whole genome shotgun sequence
NZ_ABDQ01000036
7.6 KB
7 CDS

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whole genome shotgun sequence
NZ_ABDQ01000037
7.1 KB
2 CDS

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whole genome shotgun sequence
NZ_ABDQ01000038
3.2 KB
4 CDS

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whole genome shotgun sequence
NZ_ABDQ01000039
2.8 KB
4 CDS

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whole genome shotgun sequence
NZ_ABDQ01000040
2.7 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDQ01000041
2.6 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000042
1.6 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000043
1.5 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000044
1.5 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000045
1.4 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000046
1.3 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000047
1.2 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000048
1.2 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDQ01000049
1.1 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000050
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000051
1.1 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000052
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000053
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000054
1.0 KB
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000055
1.0 KB
3 CDS

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whole genome shotgun sequence
NZ_ABDQ01000056
1.0 KB
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000057
1019 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000058
1018 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000059
1017 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000060
1015 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000061
1012 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000062
1008 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000063
985 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000064
976 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABDQ01000065
963 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000066
962 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000067
953 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000068
946 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000069
934 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000070
920 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000071
914 bytes
2 CDS

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whole genome shotgun sequence
NZ_ABDQ01000072
897 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000073
889 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000074
541 bytes
1 CDS

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whole genome shotgun sequence
NZ_ABDQ01000075
363 bytes
0 CDS

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whole genome shotgun sequence
NZ_ABDQ01000076
260 bytes
0 CDS

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Taxonomy

External Links

Clostridium botulinum C str. Eklund

Search Genome

Sequences

PubMed Search for Clostridium botulinum C str. Eklund

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